Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0192 ATGGTTCTCCCGATAGCTGTCGAGGATGTTAAGCGAGAGGTAAAGATCTTGAAAGCACTTGCCGGCCATGAGAATGTAGTTCAGTTCTACAATGCTTTTGAAGATGATTCGTATGTGTACATAGTTATGGAGTTGTGCGAAGGTGGAGAACTGCTAGATCGGATATTGGCTAAGAAGAACAGCCGTTATACTGAAAAAGATGCAGCAGTGGTTGTAAGGCAGATGCTCAAGGTTGCAGCTGAGTGTCATTTACATGGTTTGGTACATCGGGACATGAAACCAGAGAATTTTCTTTTCAAATCATCCAAAGAAAACTCACCTTTAAAAGCTACGGATTTTGGTTTGTCAGATTTCATAAAACCTGGAAAGAAGTTTCATGATATTGTTGGCAGTGCATACTATGTTGCACCTGAAGTGCTAAAACGGAAGTCAGGCCCTGAATCAGATGTGTGGAGTATTGGTGTTATTACATACATATTGCTGTGTGGAAGACGCCCGTTTTGGGACAAGACTGAGGATGGTATTTTCAAGGAGGTCTTACGTAACAAGCCTGATTTCCGCAGGAAACCATGGCCAACTATAAGCAATGCTGCCAAAGATTTCATGAAGAAATTGCTGGTCAAGGATCCTCGGGCAAGATTAACCGCTGCTCAGGCTCTGTCTCATCCATGGGTCAGAGAAGGAGGAGAAGCATTGGAGATTCCTATTGATATATCTGTTCTGAGCAACATGCGGCAATTTGTGAAGTATAGTCGATTGAAACAATTTGCACTGAGGGCATTGGCTAGCACATTAAATGAAGAAGAGTTGGCTGATCTAAAAGATCAATTTGACACAATAGATGTGGACAAAAATGGTTCTATTAGTCTGGAAGAGATGAGACAGGCTCTTGCTAAAGATCAATCTTGGAAGCTGAAAGAATCACGTGTACTAGAGATATTGCAGGCGATAGACAGTAACACAGATGGGCTGGTGGATTTCGCTGAGTTTGTGGCTGCTACGTTACATGTGCATCAATTGGAGGAACATGACTCCGAAAAGTGGCAGCTACGGTCGCAGGCGGCATTTGAGAAATTTGACATAGACAAGGATGGCTATATTACTCCAGAAGAACTTAGAATGCATACGGGCTTAAGAGGCTCCATTGATCCTCTGCTTGAGGAAGCCGATATTGACAAGGATGGAAAAATCAGCCTGCCGGAGTTTCGTAGACTCCTAAGAACTGCAAGCATCGGTTCTCGAAATTTGACGAGCCCTACTGGCAATCCGCGAATTATCTTAGATTAG 1287 0.432 MVLPIAVEDVKREVKILKALAGHENVVQFYNAFEDDSYVYIVMELCEGGELLDRILAKKNSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSSKENSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFMKKLLVKDPRARLTAAQALSHPWVREGGEALEIPIDISVLSNMRQFVKYSRLKQFALRALASTLNEEELADLKDQFDTIDVDKNGSISLEEMRQALAKDQSWKLKESRVLEILQAIDSNTDGLVDFAEFVAATLHVHQLEEHDSEKWQLRSQAAFEKFDIDKDGYITPEELRMHTGLRGSIDPLLEEADIDKDGKISLPEFRRLLRTASIGSRNLTSPTGNPRIILD* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0192 428 Pfam EF-hand domain pair 354 406 IPR002048 GO:0005509
Dod05g0192 428 Pfam EF-hand domain pair 272 334 IPR002048 GO:0005509
Dod05g0192 428 SMART serkin_6 2 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0192 428 Gene3D Transferase(Phosphotransferase) domain 1 51 245 - -
Dod05g0192 428 Pfam Protein kinase domain 9 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0192 428 Gene3D - 246 405 - -
Dod05g0192 428 ProSitePatterns EF-hand calcium-binding domain. 390 402 IPR018247 -
Dod05g0192 428 Gene3D - 266 335 - -
Dod05g0192 428 ProSiteProfiles EF-hand calcium-binding domain profile. 347 382 IPR002048 GO:0005509
Dod05g0192 428 CDD STKc_CAMK 1 224 - -
Dod05g0192 428 ProSiteProfiles EF-hand calcium-binding domain profile. 305 340 IPR002048 GO:0005509
Dod05g0192 428 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 28-LIKE 1 416 - -
Dod05g0192 428 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 416 - -
Dod05g0192 428 SUPERFAMILY Protein kinase-like (PK-like) 8 247 IPR011009 -
Dod05g0192 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 87 99 IPR008271 GO:0004672|GO:0006468
Dod05g0192 428 ProSitePatterns EF-hand calcium-binding domain. 318 330 IPR018247 -
Dod05g0192 428 ProSiteProfiles EF-hand calcium-binding domain profile. 268 303 IPR002048 GO:0005509
Dod05g0192 428 ProSitePatterns EF-hand calcium-binding domain. 281 293 IPR018247 -
Dod05g0192 428 SUPERFAMILY EF-hand 257 408 IPR011992 -
Dod05g0192 428 SMART efh_1 272 300 IPR002048 GO:0005509
Dod05g0192 428 SMART efh_1 351 379 IPR002048 GO:0005509
Dod05g0192 428 SMART efh_1 309 337 IPR002048 GO:0005509
Dod05g0192 428 SMART efh_1 381 409 IPR002048 GO:0005509
Dod05g0192 428 ProSitePatterns EF-hand calcium-binding domain. 360 372 IPR018247 -
Dod05g0192 428 ProSiteProfiles EF-hand calcium-binding domain profile. 385 412 IPR002048 GO:0005509
Dod05g0192 428 Gene3D Phosphorylase Kinase; domain 1 4 50 - -
Dod05g0192 428 ProSiteProfiles Protein kinase domain profile. 1 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0192 Dod-Chr5 2454787 2457846 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0192 1 421 EF-hand Containing Proteins AT2G17890 87.648 0.0 769
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dod05g0192 Pkinase 1.7e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0192 K13412 - gmx:100817249 794.267