Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0189 ATGCTGAGAAATCTTCATAACATGACAATCCTCCGTGTGTTGCTCCTTTTGGGATTCTTGTGGACTGAGACTCATGTCATCTCCTCTTTTACTGATCCTCAAGATGGTGCTGCGCTTAGATCTTTAAAGGATATATGGCAAAATACTCCACCCAGCTGGGACAAATCAGATGATCCTTGTGGAGCACCCTGGGAAGGAGTGACCTGCAACAAATCAAGGGTTACTTCATTGGGACTGTCAACCATGGGCCTCAAGGGTAAACTAAGTGGAGACATTGGTGGGCTCGCAGAACTAAGATCCTTGGACTTGTCATTTAACAGAGGTTTAACCGGTCCTCTCTCTCCACAGTTAGGAGACCTAAGCAAACTAAATATCCTAATTCTGGCTGGTTGCGGCTTCAGTGGGAACATTCCAGATGCATTGGGAAATCTATCAGAGCTATCTTTCCTGGCTTTAAACTCAAACAACTTCACTGGAAAAATACCTCCTTCATTGGGAAAGCTCTCCAAACTATATTGGTTGGACTTGGCAGACAATCAGCTGACAGGGTCTATCCCAGTTTCAACCTCCACCACCCCCGGATTAGACCTCCTTCTAAAGGCTAAGCACTTCCATTTCAATAAGAACCAGCTTTCAGGTACCATTCCCCCAGAACTTTTCGGCTCTGACATGGTACTCATACACATATTATTTGATGGAAACAATTTAAATGGGAATATTCCATCAACACTAGGACTAGTTACAACACTAGAGGTTCTTCGGCTTGATAGAAATTCCCTGACAGGAGAGGTCCCTCCAAATCTCGATAACCTTACAAACATCAATGAATTGAATTTAGCACACAATAATTTGACAGGTCCTTTGCCAGACTTAAGTCAAATGGATACCCTCAACTATGTGGATCTTAGTAACAACTCTTTTGATCCATCTGAACCTCCAATTTGGTTCTCAACTCTACCATCACTGACCACACTTGTTATGGAGTTTGGATCCCTGCAAGGTCCTCTTCCATCAAAACTCTTCAGCATTCCTCAAATTCAGCAAGTGAAACTAAGAAACAATGCATTGAACAATACACTAGACCTGGGTGACAACATTTGTCCCCAGCTTCAGCTTGTTGATTTGCAAGACAACCAGATTTCCTCTGTAACATTCCGTTCACAATACAAGAATACATTAATCCTTATAGGAAATCCAGTGTGCAGTGTTCTCTCAAATACCAATTACTGCCAACTTCAGCAACAGCCTAAACAACCTTACTCTACTAGCTTGGCTAATTGTGGAGGCAAATCTTGTCCTCCTGATCAAAAGCTCAGCCCACAAAGTTGTGAATGTGCCTATCCTTATCAAGGAATGTTGTACTTCAGAGGACCCTTGTTCAGAGAGCTATCAAATGTCAACATTTTCCATTCACTTGAGATGAGCTTATGGGTGAAATTGGGCCTAACTCCTGGATCAGTTTCTTTACAAAACCCCTTCTTTAATAGTGATGATTATCTTCAAGTGCAACTAGCACTCTTTCCTCCAATAGGTCAATATTTCAACAGGTCAGAAATTCAAAGAATTGGGTTTGAATTGAGTAATCAAACTTACAAGCCTCCTAAAGAGTTTGGTCCTTATTACTTTATTGCATTCCCTTATGCTTTCCCAGATTCCCACGAAGGAACTTCTCTTAGCACTGGTGTTATTATTGGGATAGCAATTGGCTCAACATTTCTGTTTCTGAGCCTCATAGGGTTAGGGATATATGCAATTCTGCAAAAGAAGCGTGCAGAGAGAGCCATTGGATTAAGTAGACCATTTGCGTCTTGGGCACCAAGTGGCAAGGATAGTGGAGGTGCCCCACAATTAAAGGGAGCAAGATGGTTCTCTTATGATGAACTAAAGAAGTGCACCAGTAATTTCTCTGAAAGCAATGAGATAGGCTTTGGAGGTTATGGCAAGGTGTACAAAGGGGTGCTTCCTGATGGAAAAATGGTTGCAATCAAGCGAGCTCAGCAAGGATCAATGCAAGGAGGCCTAGAGTTCAAGACTGAAATCGAATTGCTTTCAAGAGTTCACCACAAGAACCTTGTTGGCCTCGTGGGATTTTGCTTTGAACAAGGAGAACAGATGTTGGTTTATGAATTCATGCCCAATGGAACACTTAGAGAGAGTTTGTCTGGAAGATCTGACATTCATCTTGATTGGAAGAGGAGACTCCGCATCGCCCTTGGCTCAGCCAGAGGACTTGCATACCTGCATGAACTTGCCAACCCTCCCATAATCCACAGAGATGTTAAGTCAACTAATATCTTGCTGGATGAAAATTTGACAGCAAAGGTTGCAGATTTTGGCTTGTCTAAGTTAGTATCAGACAGTGAAAAAGGGCATGTTTCTACTCAGGTTAAAGGGACATTGGGCTATCTGGATCCTGAATATTACATGACACAACAACTAACTGAGAAGAGCGATGTCTACAGTTTTGGAGTAGTAATGCTTGAACTCATAACCTCAAGACAGCCCATTGAGAAGGGTAAGTACATTGTCAGAGAGGTTAGAACCCTTTTCAACAAGCATGATGAGGAACACTATGGCTTAAGTAACCTCATGGATCCAATGGTAAGAAGCACACCAAACCTCATAGGATTTGGGAAGTTCTTGGAGTTAACACTGCAGTGTGTTGAGGAATCAGCTTCTGACCGCCCTACAATGAGTGAAGTTGTGAAAGCACTTGAGACAATTCTGCAGAATGATGGGGTCAATACAAACTCTACATCTGCATCCTCATCTGCCACTGACTTTGGAGTTTCAAAGGGTACCATGAGACACCCGTATATTGATGCTACCACTTTTACTAAGAAGGACAACGTTAGTGACAGCAGTGCCTTTGATTACAGTGGAGGATACACACTTTCAGCAAAAGTTGAACCCAAATAG 2919 0.4241 MLRNLHNMTILRVLLLLGFLWTETHVISSFTDPQDGAALRSLKDIWQNTPPSWDKSDDPCGAPWEGVTCNKSRVTSLGLSTMGLKGKLSGDIGGLAELRSLDLSFNRGLTGPLSPQLGDLSKLNILILAGCGFSGNIPDALGNLSELSFLALNSNNFTGKIPPSLGKLSKLYWLDLADNQLTGSIPVSTSTTPGLDLLLKAKHFHFNKNQLSGTIPPELFGSDMVLIHILFDGNNLNGNIPSTLGLVTTLEVLRLDRNSLTGEVPPNLDNLTNINELNLAHNNLTGPLPDLSQMDTLNYVDLSNNSFDPSEPPIWFSTLPSLTTLVMEFGSLQGPLPSKLFSIPQIQQVKLRNNALNNTLDLGDNICPQLQLVDLQDNQISSVTFRSQYKNTLILIGNPVCSVLSNTNYCQLQQQPKQPYSTSLANCGGKSCPPDQKLSPQSCECAYPYQGMLYFRGPLFRELSNVNIFHSLEMSLWVKLGLTPGSVSLQNPFFNSDDYLQVQLALFPPIGQYFNRSEIQRIGFELSNQTYKPPKEFGPYYFIAFPYAFPDSHEGTSLSTGVIIGIAIGSTFLFLSLIGLGIYAILQKKRAERAIGLSRPFASWAPSGKDSGGAPQLKGARWFSYDELKKCTSNFSESNEIGFGGYGKVYKGVLPDGKMVAIKRAQQGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMPNGTLRESLSGRSDIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSEKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELITSRQPIEKGKYIVREVRTLFNKHDEEHYGLSNLMDPMVRSTPNLIGFGKFLELTLQCVEESASDRPTMSEVVKALETILQNDGVNTNSTSASSSATDFGVSKGTMRHPYIDATTFTKKDNVSDSSAFDYSGGYTLSAKVEPK* 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0189 972 SUPERFAMILY Protein kinase-like (PK-like) 620 920 IPR011009 -
Dod05g0189 972 SUPERFAMILY L domain-like 39 412 - -
Dod05g0189 972 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Dod05g0189 972 ProSitePatterns Serine/Threonine protein kinases active-site signature. 755 767 IPR008271 GO:0004672|GO:0006468
Dod05g0189 972 Gene3D Ribonuclease Inhibitor 292 437 IPR032675 -
Dod05g0189 972 SMART serkin_6 635 908 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0189 972 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 8 941 - -
Dod05g0189 972 ProSitePatterns Protein kinases ATP-binding region signature. 641 663 IPR017441 GO:0005524
Dod05g0189 972 Gene3D Ribonuclease Inhibitor 32 225 IPR032675 -
Dod05g0189 972 Pfam Protein tyrosine and serine/threonine kinase 638 905 IPR001245 GO:0004672|GO:0006468
Dod05g0189 972 CDD STKc_IRAK 641 908 - -
Dod05g0189 972 PANTHER LRR RECEPTOR-LIKE KINASE 8 941 - -
Dod05g0189 972 ProSiteProfiles Protein kinase domain profile. 635 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0189 972 Gene3D Phosphorylase Kinase; domain 1 609 710 - -
Dod05g0189 972 Gene3D Ribonuclease Inhibitor 226 291 IPR032675 -
Dod05g0189 972 Gene3D Transferase(Phosphotransferase) domain 1 711 931 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0189 Dod-Chr5 2342653 2350988 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0189 6 972 Receptor kinase-like Gene Family AT1G79620 71.900 0.0 1444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Dod05g0189 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0189 - - gmx:100792249 1729.15