Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0179 ATGCTATCACTATCTTTCCCTTCACCTCTCACTGCGGCCACCACTACCAATCTCTCCTCTCCGCCGTGCCACGTCAGATCCCTGCCAAGACTTGCCGCTTCTGCCTCCGCCGGAGCCACCAGTCTGCCGACGGCATCGTTATACGAGATTCTCGGGATTCCCGCCGCCGCCTCGAGGGGCGAGATCAAGGCGGCGTACCGACGACTAGCCAGGGTCCGCCACCCTGACGCGGTGGCGACGACCGGCGACCGGAACGGCCCGTCGTCGTCGGCGGACGAGTTCATGAAACTCCATGCTGCGTACAGCACACTATCGGATCCCGAGAAGCGCGCAAGCTACGACATGAGCTTGTTCCGGAGGCGCCAGCAGCCACTGACAGCGGCGACGGAGACGGCGTCGAGGTTTTCCGGCTACGTTGGCCGGAACTGGGAAACTGACCAGTGCTGGTAG 450 0.6333 MLSLSFPSPLTAATTTNLSSPPCHVRSLPRLAASASAGATSLPTASLYEILGIPAAASRGEIKAAYRRLARVRHPDAVATTGDRNGPSSSADEFMKLHAAYSTLSDPEKRASYDMSLFRRRQQPLTAATETASRFSGYVGRNWETDQCW* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0179 149 Gene3D DnaJ domain 32 136 IPR036869 -
Dod05g0179 149 SMART dnaj_3 45 109 IPR001623 -
Dod05g0179 149 ProSitePatterns Nt-dnaJ domain signature. 94 113 IPR018253 -
Dod05g0179 149 SUPERFAMILY Chaperone J-domain 41 117 IPR036869 -
Dod05g0179 149 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 32 149 - -
Dod05g0179 149 MobiDBLite consensus disorder prediction 1 22 - -
Dod05g0179 149 PRINTS DnaJ domain signature 48 66 IPR001623 -
Dod05g0179 149 PRINTS DnaJ domain signature 89 109 IPR001623 -
Dod05g0179 149 PRINTS DnaJ domain signature 66 81 IPR001623 -
Dod05g0179 149 Pfam DnaJ domain 47 114 IPR001623 -
Dod05g0179 149 ProSiteProfiles dnaJ domain profile. 46 117 IPR001623 -
Dod05g0179 149 CDD DnaJ 48 106 IPR001623 -
Dod05g0179 149 PANTHER DNAJ PROTEIN HOMOLOG-LIKE 32 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0179 Dod-Chr5 2227922 2228967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0179 48 114 C2H2 Transcription Factor Family AT1G74250 44.776 3.75e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0179 - - adu:107478883 146.362