Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0135 ATGCTATCAAGGTTGATGGACTTCCTGGGCGCCTGCTGGCGGCGAAGAAGATCGCGGGACCGGAAGGGATCCGATGTCTCCGGTGGGCGGAAGGAGGGGCTGCTGTGGTACAAGGATGGAGGGCAGCACTTGTTTGGTGAATTCTCTATTGCTGTGGTTCAGGCCAACAACTTGCTTGAGGATCAGAGCCAGATTGAGTCTGGCCCTCTAAGCTTGCTTGACACTGGCCCTTTTGGTACCTTTGTTGGTGTTTATGATGGTCATGGCGGACCAGAGACGTCGCGCTACATTTGTGATAATCTGTTCCAGCATCTAAAACGATTTGCGTCTGAGCATAAGTCCATGTCTGTGGAGGTCATTCGGAAGGCGTACCAAGCCACGGAAGAGGGTTTTCTGTCTGTGGTCACCAAGCAGTGGCCTTTGAACCCCCAAATTGCTGCCGTGGGATCTTGTTGTTTGGTTGGTGTGATTTGTGGTGATGCACTCTACGTTGCTAACCTCGGTGATTCCCGTGCTGTGCTTGGAAGGGTTGTCAGAGCCACTGGGGAGGTTCTGGCGATTCAACTGTCATCAGAGCATAATGTGGCTATAGAATCTGTGAGACAAGAGATGCATTCTTCGCATCCAGATGACTCGAAAATCGTGGTTCTAAAGCACAATGTATGGCGGGTGAAGGGTCTGATACAGGTTTCTAGATCCATTGGTGATATATACCTTAAAAAGGCAGAATTTAACAAGGAACCTTTGTATGCTAAGTTTCGTCTTCGGGAAACTTTTAAAAAGCCAATTTTGAGCTCTGAGCCATCAATATCTGTTCATGAACTTCAACAGCATGATCAATTTCTCATATTTGCTTCTGATGGTCTTTGGGAACACCTGAGTAATCAGGATGCCGTTGATATAGTTCAAAATCATCCTCACAATGGAATTGCTAGGAGGCTCATCAAAGCAGCTTTGCAGGAAGCCGCGAAGAAACGAGAGATGAGGTACTCTGACTTGAAGAAAATCGACCGTGGTGTCCGGCGACATTTCCACGATGACATCACAGTTGTAGTTGTATTTCTTGACTCCAATCTCGTCAGCCGAGCCAGCTCAGTGCAGGGCCCTCCTGTATCGGTGAGGGGAGGGGGTGTTCCCCTACCTTCTAGAACCTTGGCTCCCTGTGCTGAACTTGGTTCTAACTGA 1185 0.4869 MLSRLMDFLGACWRRRRSRDRKGSDVSGGRKEGLLWYKDGGQHLFGEFSIAVVQANNLLEDQSQIESGPLSLLDTGPFGTFVGVYDGHGGPETSRYICDNLFQHLKRFASEHKSMSVEVIRKAYQATEEGFLSVVTKQWPLNPQIAAVGSCCLVGVICGDALYVANLGDSRAVLGRVVRATGEVLAIQLSSEHNVAIESVRQEMHSSHPDDSKIVVLKHNVWRVKGLIQVSRSIGDIYLKKAEFNKEPLYAKFRLRETFKKPILSSEPSISVHELQQHDQFLIFASDGLWEHLSNQDAVDIVQNHPHNGIARRLIKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRASSVQGPPVSVRGGGVPLPSRTLAPCAELGSN* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0135 394 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Dod05g0135 394 SUPERFAMILY PP2C-like 56 356 IPR036457 -
Dod05g0135 394 Gene3D - 36 366 IPR036457 -
Dod05g0135 394 ProSiteProfiles PPM-type phosphatase domain profile. 44 355 IPR001932 -
Dod05g0135 394 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 5 386 - -
Dod05g0135 394 PANTHER ALPHABET, ISOFORM E-RELATED 5 386 - -
Dod05g0135 394 CDD PP2Cc 54 355 IPR001932 -
Dod05g0135 394 Pfam Protein phosphatase 2C 81 324 IPR001932 -
Dod05g0135 394 SMART PP2C_4 40 353 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0135 Dod-Chr5 1807534 1814144 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0135 1 383 PP2C-type Phosphatase Gene Family AT3G51370 75.521 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0135 K01102 - gmx:100777920 698.353