Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0126 ATGGGTGCATCGCACAAATGGTTGAGAATCATTCGAAGGAAGTTCCTAAGATCATCCAATAAAGACATCATTCTTTCCCGCACAAGTGTTTGCACGACCCACCAAAGTGAAGAAGAGGCCATACTTAGGAATGAAGCTACCACCATAGAAGATTACCTCAATTTTGCAATACCAACAACTTCCTCATCAACATCAACCGCATTGTTCACCAAGGAAGATGTTGCAGCAATCAAGATCCAAGCTTATTTCAGGGGTCATCTTGCAAGACGAGCATATGGAGCACTTAAAAGCCTTGTGAAGCTGCAAGCATTGGTGCGAGGGGTGTTTGTGAGGAAACAGTCACGTATAGCTATGCAATGTATGCACGCCCTTGTCCGCTTACAAGTCAGGGTTCGCGCAAGGCAGCTCCTTGGAAGCTTTGATAATGATCAATTTGCCAATGTCTAG 447 0.4474 MGASHKWLRIIRRKFLRSSNKDIILSRTSVCTTHQSEEEAILRNEATTIEDYLNFAIPTTSSSTSTALFTKEDVAAIKIQAYFRGHLARRAYGALKSLVKLQALVRGVFVRKQSRIAMQCMHALVRLQVRVRARQLLGSFDNDQFANV* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0126 148 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 116 IPR027417 -
Dod05g0126 148 Gene3D - 69 123 - -
Dod05g0126 148 PANTHER IQ-DOMAIN 5-RELATED 2 138 - -
Dod05g0126 148 ProSiteProfiles IQ motif profile. 72 100 IPR000048 GO:0005515
Dod05g0126 148 SMART iq_5 71 93 IPR000048 GO:0005515
Dod05g0126 148 SMART iq_5 94 115 IPR000048 GO:0005515
Dod05g0126 148 PANTHER OS04G0561100 PROTEIN 2 138 - -
Dod05g0126 148 Pfam IQ calmodulin-binding motif 75 92 IPR000048 GO:0005515
Dod05g0126 148 Pfam IQ calmodulin-binding motif 96 113 IPR000048 GO:0005515
Dod05g0126 148 ProSiteProfiles IQ motif profile. 96 123 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0126 Dod-Chr5 1741675 1742654 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0126 1 137 IQD Protein Family AT3G51380 48.175 3.26e-34 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0126 - - cam:101507643 168.703