Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0125 ATGAATTCCCCCGCGGGGCACAGCAGCATTGGTGCAGAATACAAGTTTCCGAAATTCTGCACCAAAGCTACTCCAAATGGAAATTTAGAGACTACAGGGGTTCCAACTTCTGTGCCCGTTCGTGCAGCACACGAGCTTCTTCTAGCAGGGCATCGCTATTTGGATGTGAGGACTTCAGAAGAGTTCAATGCCGGTCACGCTCCGGGTGCTATTAACATACCTTACTGGCACAACTATGGAGATGATACGACAAAAAATTCTGACTTCCTCGCAGAAACCTCATCACAATTCAGCAAAGATGATAAAATCATTGTTGGGTGTAAGAGTGGCAGAAGGTCCAAGATGGCCGCTACTGACTTATTAGCAGCAGGATTTACTGGAGTTAAGGACATGGCTGGTGGTTATGATGATTGGACCCAAAATGGACTTCCAACAGAACTGTGA 444 0.464 MNSPAGHSSIGAEYKFPKFCTKATPNGNLETTGVPTSVPVRAAHELLLAGHRYLDVRTSEEFNAGHAPGAINIPYWHNYGDDTTKNSDFLAETSSQFSKDDKIIVGCKSGRRSKMAATDLLAAGFTGVKDMAGGYDDWTQNGLPTEL* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0125 147 Gene3D - 23 146 IPR036873 -
Dod05g0125 147 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 12 146 - -
Dod05g0125 147 CDD RHOD 54 138 - -
Dod05g0125 147 ProSiteProfiles Rhodanese domain profile. 47 147 IPR001763 -
Dod05g0125 147 SMART rhod_4 37 144 IPR001763 -
Dod05g0125 147 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 15, CHLOROPLASTIC 12 146 - -
Dod05g0125 147 Pfam Rhodanese-like domain 53 140 IPR001763 -
Dod05g0125 147 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 33 145 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0125 Dod-Chr5 1737465 1740875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0125 36 144 Sulfurtransferasese or Rhodanese AT5G66170 45.946 1.25e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0125 - - gmx:100305968 198.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0454 02 5959871 5960811 Dod05g0125 05 1737465 1740875 PCT
Dod02g0399 02 5355986 5358743 Dod05g0125 05 1737465 1740875 PCT