Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0112 ATGCTGCCTCAACGTGAAGATAATGACCATGATGACAAATCCAAGTGTCTTGCATCCTCCTTCTCTTCTCCTCCTCATTATTATAACTTGGAGAAAGTTTTCCCTGTCTATGCCATGGGAAGAATTCCCAACTCACACCCTCCCTCTGCGTTGGAATCTTCACTTCATCACCATTTGGATGGTGTTGACACTATTTGGGATGCTATCAGAGAAGAAGCCAAAGTGGAGGCAGAAAGGGAGCCAATTTTAAGTAGTTTCTTGTATGCCAGTATATTGTCACATGATTGCTTAGAGCAAGCCCTGGCTTTTGTTCTTGCGAATCGTCTCCAAAATCCTACTCTTTTGGCAACTCAGTTGATGGATATATTCTGCAATGTGATGATGCATGATAAAGGTATCCAGAGATCTATTCGCTTAGACGTTGAGGCATTTAAAGACCGGGATCCTGCTTGTTTGTCGTATTGCTCCGCACTTCTGTATACAAAGGGTTTCCATTCTTTGCAAGTGTATCGAGTAGCACATGCATTGTTGGGGCAGGGACGCAAGGTCTTGGCTTTAGCTTTGCAAAGTCGAGTTAGTGAGGTTTTTGGAGTTGATATACATCCTGCTGCGAGAATTGGGGATGGAATTTTATTAGATCATGGGACAGGTGTGGTTATTGGTGAAACTGCTATTGTTGGAAGCAGAGTTTCATTGATGCAAGGTGTAACTTTAGGAGGGACAGGGAAGGGAGTTGGTGATCGCCACCCCAAAGTAGCTGAAGGTGTTCTGATTGGAGCTAGTGCAACTATACTTGGGAACATAAGAATTGGTGAAGGTGTGATGATAGCTTCTGGCTCCCTTGTGTTAAAAGAGGTCCCTCCCCACAGCATTGTGGCAGGAATTCCAGCAAATGTTATTGGACGTCTACGTGAGCATGATCCATCTTTAACCATGAAGCATGATGCTACAAAAGAATTTTTCACACATTTAGGTGCTAACTTAAGAAATGGAAAGCCGAATGAAGCTCAGAATCCAGATATAAGTGATGTGATGAGACGAGATCCGGTAGCATAG 1056 0.4347 MLPQREDNDHDDKSKCLASSFSSPPHYYNLEKVFPVYAMGRIPNSHPPSALESSLHHHLDGVDTIWDAIREEAKVEAEREPILSSFLYASILSHDCLEQALAFVLANRLQNPTLLATQLMDIFCNVMMHDKGIQRSIRLDVEAFKDRDPACLSYCSALLYTKGFHSLQVYRVAHALLGQGRKVLALALQSRVSEVFGVDIHPAARIGDGILLDHGTGVVIGETAIVGSRVSLMQGVTLGGTGKGVGDRHPKVAEGVLIGASATILGNIRIGEGVMIASGSLVLKEVPPHSIVAGIPANVIGRLREHDPSLTMKHDATKEFFTHLGANLRNGKPNEAQNPDISDVMRRDPVA* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0112 351 SMART SATase_N_2_a 65 169 IPR010493 GO:0005737|GO:0006535|GO:0009001
Dod05g0112 351 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 19 329 - -
Dod05g0112 351 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 258 286 IPR018357 GO:0016740
Dod05g0112 351 Gene3D Hexapeptide repeat proteins 199 326 - -
Dod05g0112 351 PANTHER SERINE ACETYLTRANSFERASE 19 329 - -
Dod05g0112 351 Pfam Bacterial transferase hexapeptide (six repeats) 250 282 IPR001451 -
Dod05g0112 351 Gene3D serine acetyltransferase, domain 1 49 198 IPR042122 -
Dod05g0112 351 SUPERFAMILY Trimeric LpxA-like enzymes 63 313 IPR011004 -
Dod05g0112 351 MobiDBLite consensus disorder prediction 327 351 - -
Dod05g0112 351 CDD LbH_SAT 196 296 IPR045304 -
Dod05g0112 351 Pfam Serine acetyltransferase, N-terminal 65 168 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0112 Dod-Chr5 1596565 1601241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0112 30 334 Miscellaneous Gene Families AT2G17640 68.197 2.61e-142 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0112 K00640 - gmx:100775449 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0385 02 5161166 5165464 Dod05g0112 05 1596565 1601241 PCT
Dod05g0112 05 1596565 1601241 Dod02g0185 02 2643485 2647050 PCT