Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0111 ATGGGTGGTTCAGGTGATAACAACAATTCCAATCCACCCATGGCCAGAATTCTCCAAGGAGGGTTGGATCATGAAACAAGAAAATTTGGACAGAACAGACGAGCTTTGAGTGTAATCAATCAGAATCTGCAAGGTCGACCTTACCCTTGCGTTGTTAACAAGAGGCCTTTGCCTGAAAAACATGAACTTTGTGAAAAGAAGCAGGTGGATCCTGTGCATAGACCCATCACAAGGAGGTTTGCTGCACAAATTGCTAGCATGCAACAATCTTGTGTTGAGGAACCTAACAAGTCAAGGTCCTCAGTTTCGAACTCGAATAATGGATTTGGAGATACTATAGCCATTGATGATGAACAGAAGTCACCAGTACCAGCAGACCAACCGGTGCCAATGTCATTGGAGCAACCAGAACCAATGCAGATGGAGGAAGTTGAGATGGAGGATATAGTTGAAGAACCCATTCTGAACATTGATAGCTGTGATGCGAATAATCATCTTGCAGTAGTAGAATATATTGAAGATCTTCACTTATACTACAAAAAAATCGAGAGTGTCGCACCGAATTATATGGCACAACAATTTGACATTAATGAAAGAATGAGGGCTATACTAATTGACTGGCTTATTGAGGTGCACGACAAATTTGACCTCATGCAAGAGACATTGTTTCTTACAATTAATCTCATAGACAGATTTTTGACCAAGCAAACAGTACTGAGAAAGAAGCTTCAGTTGGTTGGTCTGGTTGCCATGCTTTTGGCTTGCAAGTATGAGGAAGTTTCCGTGCCTGTGGTTGGCGATTTAATCCTTATATCAGACCGAGCATACTCAAGGAAGGAAGTTTTGGAAATGGAGAAGTTGATGCTCAATACATTGAAGTTCAACATGTCTGTGCCAACACCATATGTTTTTATGAGAAGATTCCTGAAGGCAGCCCAAGCAGACAAAAAGCTTGAGATGCTGGCTTTCTTCTTGGTAGAGCTATCTCTTGTGGAATATGAGATGCTGAAGTTCCCACCATCCTTGCTAGCTGCAGCTGCTGTCTACACAGCACAATGCACTGTCAGTGGTTTCAAACACTGGACTAAGACGTGTGAATGGCACACAAACTACTCAGAAGATCAGCTATTAGCATGCTCTAATATGATGGTTGGATTCCACAAGAAGGCTGGGACAGGGAAACTTAAAGGGGTGCATAGGAAGTACAGTTCATCTAAATTCAGCTTTACTGCAAAATGCGAGCCAGCATGTTTTCTTCTGGAGAACCATTTGTAG 1275 0.422 MGGSGDNNNSNPPMARILQGGLDHETRKFGQNRRALSVINQNLQGRPYPCVVNKRPLPEKHELCEKKQVDPVHRPITRRFAAQIASMQQSCVEEPNKSRSSVSNSNNGFGDTIAIDDEQKSPVPADQPVPMSLEQPEPMQMEEVEMEDIVEEPILNIDSCDANNHLAVVEYIEDLHLYYKKIESVAPNYMAQQFDINERMRAILIDWLIEVHDKFDLMQETLFLTINLIDRFLTKQTVLRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDRAYSRKEVLEMEKLMLNTLKFNMSVPTPYVFMRRFLKAAQADKKLEMLAFFLVELSLVEYEMLKFPPSLLAAAAVYTAQCTVSGFKHWTKTCEWHTNYSEDQLLACSNMMVGFHKKAGTGKLKGVHRKYSSSKFSFTAKCEPACFLLENHL* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0111 424 PIRSF Cyclin_A_B_D_E 21 424 IPR039361 -
Dod05g0111 424 SMART Cyclin_C_2 299 416 IPR004367 -
Dod05g0111 424 SMART cyclin_7 206 290 IPR013763 -
Dod05g0111 424 SMART cyclin_7 303 385 IPR013763 -
Dod05g0111 424 CDD CYCLIN 297 384 IPR013763 -
Dod05g0111 424 Pfam Cyclin, C-terminal domain 299 414 IPR004367 -
Dod05g0111 424 PANTHER CYCLIN-B2-1 22 419 - -
Dod05g0111 424 MobiDBLite consensus disorder prediction 89 133 - -
Dod05g0111 424 CDD CYCLIN 200 289 IPR013763 -
Dod05g0111 424 PANTHER CYCLINS 22 419 IPR039361 -
Dod05g0111 424 Pfam Cyclin, N-terminal domain 185 297 IPR006671 -
Dod05g0111 424 MobiDBLite consensus disorder prediction 89 112 - -
Dod05g0111 424 Gene3D - 175 410 - -
Dod05g0111 424 Gene3D - 185 297 - -
Dod05g0111 424 SUPERFAMILY Cyclin-like 163 296 IPR036915 -
Dod05g0111 424 SUPERFAMILY Cyclin-like 298 415 IPR036915 -
Dod05g0111 424 ProSitePatterns Cyclins signature. 201 232 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0111 Dod-Chr5 1590971 1594653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0111 18 420 Core Cell Cycle Gene Families AT1G20610 59.427 2.91e-170 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0111 K21777 - gmx:100798068 600.512