Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0104 ATGACATGGGTCTCTGCTTTACCTCTCTCTCTGCAGCAAACCCCTCTTCTTCTACACTCTCCAAGGCTCAGTATTCAGCAGGCAAGTTCAGCTAGCACTGATAGCAAGAACGTGGGGTTCTCGGCAACCACCGCAAGCAGCGCAGGGAAGAGCCAATTCTCTGAGATAGCGAGCGGAAGCTTCGTGGAAGGTGCATCTGGTTCTCTTGTGTCTTCTTCTTCGCGCGGTCAGATTCTGGAGAGGCCCAATTTGAAGGTGTTCAGCTTCGGGGACCTGAAATCGGCGACGAAGAGCTTCAAATCGGACACGCTTCTTGGGGAAGGTGGGTTCGGGAGAGTGTACAAAGGGTGGCTGGATGAAAAGACGCTCACTCCGGCAAGGGCTGGGTCTGGGATGGTGGTTGCTATCAAGAAATTGAACCCTGAGAGCACGCAAGGGTTTCAAGAGTGGCAGTCAGAAGTAAACTTCTTAGGAAGGCTTTCTCACCCCAACCTGGTAAAGCTATTGGGTTATTGTTGGGATGATGATGAGCTTCTTCTTGTGTACGAGTTCATGCCAAAGGGAAGCTTGGAGAATCATCTCTTCAGAAGAAATCCTAACATAGAACCACTTTCTTGGAACACCCGGATTAAAATAGCTATTGGTGCTGCTAGGGGCCTGGCTTTCTTGCACACTTCAGAAAAGCAAGTCATCTACAGAGATTTCAAGGCTTCAAATATACTACTTGATGGGAATTATAATGCAAAAATTTCAGATTTTGGCTTGGCTAAATTGGGCCCTTCTGTGGGAGAATCACATGTAACTACCAGGGTGATGGGCACGTATGGCTATGCTGCTCCGGAATACATTGCAACAGCACAACTTACTCTAAAGTGCTTGGAACTTGACCCTAAAAACCGTCCTTCTATGAAAGAAGTAGTGGAGGCGTTGGAAGGCATAGAAGCTCTCCAAGACAAATCTAAGGAATCCAAGAACAGAAATACTCATTCTGCAGCTCCTCATCACCATCACCATCACCACAGTAACCATAAATCTCCACTTCATGCTCGGCAAACAGTTCCGAAGGTTCACCTTAGACTCTTGGAAGTTTCCTTGCTGAACACTACAATGCAGAACAGTACTGGAGGTTATTCAATCCACTTGTCTGAAGGCTTATATTGTTATCTAAGAAAATGCATCTTTGGTATCTTATCTGTTGGTCCTGTCCCAAACCACATTGCTTTTATCATGGATGGGAATAGAAGGTATGCAAAGAAGATGAATTTGGCAGAAGGTGAAGGTCACACGGCTGGATTCTCAGCACTCTTGTCCGTCCTCAGATACTGCTATGAATTGGGAGTGAAGTATGTGAGTGTCTATGCATTCAGCATTGATAATTTCAGAAGGAAGCCTAAAGATGTTCAAAACTTGATGGAAATGATGAGGCAGAAAATTGATGAGTTGCTTCAACAAGAAAGCATTATCAATGAACATGGTGTTAGATTGCATTTCACTGGAAACATTCAACTTTTGAGTGAGCCTGTCAGGGTTGCTGTTGAAAAGGAAATGAGGGTCACTGCTCATAACAACAAGAGAGTTCTTTTGATCTGTGTTGCTTATGCTTCGAGTGACGAGATTGTTCATGCTGTTCAAGAATCTTGCAAGGAGAAATGGAATAAAGTTCAAGCATCAAATGTAGCACCCAATGCCTCCAATGGTGAAGTTGCTAGAGTTGATGGAAAAAGAGACGGTATTGATTCACATTTTCATGGTTCAGTTAAAGACTATACAAATGCAACCAAAGCTTCTGGTAGTGATGGGCTGTTTGAGCACAAGGTTGAAAAACATAGTGGTAATGGGGTGGTTGAAATAGCTGAAGAGGCCAACAAGTATAAGGAGGGTGAGGTTACTTCTATAAAATTGGTGGATATTAAGAGGGACATGTACATGGCCGTTGCACCTGACCCTGACATCTTGATCAGAACTTCTGGAGAGGCTCGCCTCAGCAACTTTCTCCTTTGGCAGACTAGTGCCTGCACTTTGTATGCACCAAGCGCACTTTGGCCTGAAATTGGTGTTAGACACTTGATCTTGGCAATATTGAACTTCCAGAAATACCATCTTTATTTGGAAAAGAAAAAGAAACAGTTTTAG 2133 0.4416 MTWVSALPLSLQQTPLLLHSPRLSIQQASSASTDSKNVGFSATTASSAGKSQFSEIASGSFVEGASGSLVSSSSRGQILERPNLKVFSFGDLKSATKSFKSDTLLGEGGFGRVYKGWLDEKTLTPARAGSGMVVAIKKLNPESTQGFQEWQSEVNFLGRLSHPNLVKLLGYCWDDDELLLVYEFMPKGSLENHLFRRNPNIEPLSWNTRIKIAIGAARGLAFLHTSEKQVIYRDFKASNILLDGNYNAKISDFGLAKLGPSVGESHVTTRVMGTYGYAAPEYIATAQLTLKCLELDPKNRPSMKEVVEALEGIEALQDKSKESKNRNTHSAAPHHHHHHHSNHKSPLHARQTVPKVHLRLLEVSLLNTTMQNSTGGYSIHLSEGLYCYLRKCIFGILSVGPVPNHIAFIMDGNRRYAKKMNLAEGEGHTAGFSALLSVLRYCYELGVKYVSVYAFSIDNFRRKPKDVQNLMEMMRQKIDELLQQESIINEHGVRLHFTGNIQLLSEPVRVAVEKEMRVTAHNNKRVLLICVAYASSDEIVHAVQESCKEKWNKVQASNVAPNASNGEVARVDGKRDGIDSHFHGSVKDYTNATKASGSDGLFEHKVEKHSGNGVVEIAEEANKYKEGEVTSIKLVDIKRDMYMAVAPDPDILIRTSGEARLSNFLLWQTSACTLYAPSALWPEIGVRHLILAILNFQKYHLYLEKKKKQF* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0104 710 SUPERFAMILY Undecaprenyl diphosphate synthase 399 698 IPR036424 GO:0016765
Dod05g0104 710 Pfam Protein tyrosine and serine/threonine kinase 102 291 IPR001245 GO:0004672|GO:0006468
Dod05g0104 710 PANTHER OS02G0670100 PROTEIN 26 288 - -
Dod05g0104 710 PANTHER OS01G0588500 PROTEIN-RELATED 26 288 - -
Dod05g0104 710 Hamap Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 402 705 IPR001441 GO:0016765
Dod05g0104 710 CDD Cis_IPPS 405 698 IPR001441 GO:0016765
Dod05g0104 710 MobiDBLite consensus disorder prediction 319 349 - -
Dod05g0104 710 SUPERFAMILY Protein kinase-like (PK-like) 78 311 IPR011009 -
Dod05g0104 710 Pfam Putative undecaprenyl diphosphate synthase 409 699 IPR001441 GO:0016765
Dod05g0104 710 Gene3D Phosphorylase Kinase; domain 1 83 184 - -
Dod05g0104 710 Gene3D Transferase(Phosphotransferase) domain 1 288 356 - -
Dod05g0104 710 TIGRFAM uppS: di-trans,poly-cis-decaprenylcistransferase 402 556 IPR001441 GO:0016765
Dod05g0104 710 ProSitePatterns Undecaprenyl pyrophosphate synthase family signature. 650 667 IPR018520 GO:0016765
Dod05g0104 710 PANTHER OS02G0670100 PROTEIN 286 343 - -
Dod05g0104 710 Gene3D Transferase(Phosphotransferase) domain 1 185 287 - -
Dod05g0104 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Dod05g0104 710 ProSitePatterns Protein kinases ATP-binding region signature. 105 138 IPR017441 GO:0005524
Dod05g0104 710 PANTHER OS01G0588500 PROTEIN-RELATED 286 343 - -
Dod05g0104 710 Gene3D - 388 698 IPR036424 GO:0016765
Dod05g0104 710 MobiDBLite consensus disorder prediction 330 346 - -
Dod05g0104 710 ProSiteProfiles Protein kinase domain profile. 99 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0104 Dod-Chr5 1441835 1452604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0104 85 291 Glycoside Hydrolase AT3G07070 57.212 1.24e-70 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod05g0104 Prenyltransf 2.9e-72 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0104 - K11778 gmx:100794720 476.478