Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0103 ATGGTGAGGACCAACTTGCTGACCACCCTCTTAGTCTTCAAGAATACCATTAGAGAAGAGTTGATCAGGAGTGTGCATGTGTACCAAGTAAAGTATGGGAAGGTAAAGGAAGTTGAAAGAGAGTTTTTGTTTTCAGAGAGTGGCTCCTATGGGGAAATAAGGGCCACCCCAATTCTCATATTGCAGAAGAAGTTCTGTGTTTCTGAAGTTTCTGAAGGGTTCCAGAATGGAGTTTGGCTTTGTATCTTTGCCTTTCACTCAGATCACAAGCCTCAATTTCCCAGCACTCCATCCTTGTTGTTGGTCTCTAGAAACCCAAAGCTTGGGATGATTCCAACCTTGCTTAAAGATCTCCGTGTGATATACAAGTTGGAAAAGGACAAAGATAGTCTATCAGACTCTCCAAAGGAAGAATGCCAGGGAAACAGCAAAGATTGCCAACCATCAAGAAAAGTCGTTCCTGTGTTTGAGCAGGATCTGAATTGTCTTCCTTATGAAGATGAAGTGTCTGACTTGCCAGACAATAAGCTCGACGATGAAACCGTACCAGGTTCTGTAGAGAAGAAAAAGAGGGCACCCAGTAACCATGTAGCAAAAATTACGTTATCAGAATTGGTCAAGTATTTTGATATGCCAATCGTAGAAGCTTCAAGAAAACTAAATGTTGGACTAACAGTTCTCAAGAGGAAATGTAGAGAATTCGGTATTCCTCGCTGGCCTCATAGGAAGATCAAATCACTTGACAGTCTCATTCATGATCTTCAGGAAGAAGCGAAAAAACAAAAATCCGAGGACAAGGCCGCGGTGGCGATGGAGAAGCAAAGGATGTTGGAGAGTGAAAAGGAAACAATAGAGAGGAGACCCTTCATGGACATACAAAGTGAGACCAAGCGATTGAGGCAGGATGTCTTCAAGAAAAGACATAGAGCAAGAGCTCTTGTCAAACATAATCCTACAGTCTCTAGCAACAAAACATAA 978 0.4223 MVRTNLLTTLLVFKNTIREELIRSVHVYQVKYGKVKEVEREFLFSESGSYGEIRATPILILQKKFCVSEVSEGFQNGVWLCIFAFHSDHKPQFPSTPSLLLVSRNPKLGMIPTLLKDLRVIYKLEKDKDSLSDSPKEECQGNSKDCQPSRKVVPVFEQDLNCLPYEDEVSDLPDNKLDDETVPGSVEKKKRAPSNHVAKITLSELVKYFDMPIVEASRKLNVGLTVLKRKCREFGIPRWPHRKIKSLDSLIHDLQEEAKKQKSEDKAAVAMEKQRMLESEKETIERRPFMDIQSETKRLRQDVFKKRHRARALVKHNPTVSSNKT* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0103 325 Coils Coil 244 264 - -
Dod05g0103 325 Pfam RWP-RK domain 199 247 IPR003035 -
Dod05g0103 325 PANTHER PROTEIN RKD4 11 315 IPR044607 GO:0003700
Dod05g0103 325 ProSiteProfiles RWP-RK domain profile. 182 267 IPR003035 -
Dod05g0103 325 PANTHER PROTEIN RKD5 11 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0103 Dod-Chr5 1431610 1436906 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0103 17 325 AtRKD Transcription Factor Family AT4G35590 46.483 1.35e-81 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Dod05g0103 RWP-RK 5.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0103 - - adu:107475952 502.671