Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0095 ATGACCAAAGTTTGGCTTCTTGTTGTACTTGTGATCGTCTACAATGGCTTTCCTTCAAAAGGAATCAGCAACAATGTTTCCACAAGACCAAATGCCGTTAACGTTGGGGCAATTTTATCTTTCAACTCAACGATTGGAAGAGTGGCTAAAGTTGCCATACAAGCAGCAGTGGATGATATAAATTCCAATGCAACCATTCTCAATGGAACTAAGCTTAATATTTTCATGCAGGACACAAAATTGTCCAGTGGATTCCTAGGAATCATTGAATGCTCTTCAAACTCTTCTCGCCTTGGATCATTCATTTCCTTTATCAATGAAAAAGAAGAGGAAGACAAGTATATGGCAAAGGAAATGAAGAAGGAACAGTGCTCTTGTAGAAGGGTAGTGCATGAAGATGGATCACTGTCTGGCTCTAGTAGTGTTAGTGTCCATATTAGAAATGATGTCACTGCCGAAGATAATAACTACTAA 474 0.3882 MTKVWLLVVLVIVYNGFPSKGISNNVSTRPNAVNVGAILSFNSTIGRVAKVAIQAAVDDINSNATILNGTKLNIFMQDTKLSSGFLGIIECSSNSSRLGSFISFINEKEEEDKYMAKEMKKEQCSCRRVVHEDGSLSGSSSVSVHIRNDVTAEDNNY* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0095 157 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 11 89 - -
Dod05g0095 157 Gene3D - 31 132 - -
Dod05g0095 157 PANTHER GLUTAMATE RECEPTOR 11 89 - -
Dod05g0095 157 SUPERFAMILY Periplasmic binding protein-like I 29 83 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0095 Dod-Chr5 1292060 1297863 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0095 5 90 Ion Channels AT3G51480 48.837 4.78e-21 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0095 K05387 - ahf:114927434 137.887