Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0080 ATGCCTGTTGAAATCATTGATCTCACAGGCTCCCCTCCACCACCACCATCCAGGTCATCTCCAAGAATCCTCAACTTTGCTGCTGCTAATTCAGCAGAACATGTGCAATTTGGTAACCTTGCTATGCCTTTATGGCCAAATAATAACCCAAATCCTAATAATTTGCCTTATACCACCCAACAACATCCTACTATATGGCGACCTTCTTCAGGGAATGCCTATGAATCCACTCAGGTTCATATCCATCAATCAATAGAAGCCCAAACTCAGAAAATTCTAACTGCTCCTGCGGTATGGCCGGCTTCAGCTGGCCATACCTACGAGCCCTCTGAGACTGCTATTAGCTTCCAACCCCACATGCATGGTGATCAAGTGACTGCAGCACTTGAACCAGTAGCTGAAGCAAACGCATACCTGTTTCCTCATGGAACTAGGTTCAGGGAGAGTTGGACTCCTAGAGAGCATGAGTTATTTCTGATGGGGCTAATCAAGTGTGGAAGAGGGCGTTGGACCAAAATAGCTAGGCACTTTCTGAGTAACAAGACACCACAGCAAGTTCAAGGCTATGCCAATAGCTACTTCAGGAACCTTCCATCCACACACTTTTACAGCTTCAGGAGAAGGAACTCAGCCTATTCCACTGTCAGTTTCTTGGCAGCAGGGAACAACCTCATTGGTGGTGCATCATCTGCCTCATCATACAACATGCCCAAATCGGTCATCACTGCCAATAATAATAGTAACAATGATAATAATGAGCCAATTAAGAAGACCCTCATGCTTTTCCCAGAGAAATTAGGGCCTAGTAGTTTCTTTCAGTTTCAGCCATTAATTGGTGAAGCTAGCACAACCGCAACCACAAAAAACAACAACAACCACAATTATGCTTATTATGGGTCATTCCAGATGCAAACAATTGGTGCAGGCATCACTTCTTCCATGAATGCTAGTGGAAATTATGAACAAGTTGATTTGGAGCTGCGTTTGGGTAGAAGCCAGTGA 1002 0.4451 MPVEIIDLTGSPPPPPSRSSPRILNFAAANSAEHVQFGNLAMPLWPNNNPNPNNLPYTTQQHPTIWRPSSGNAYESTQVHIHQSIEAQTQKILTAPAVWPASAGHTYEPSETAISFQPHMHGDQVTAALEPVAEANAYLFPHGTRFRESWTPREHELFLMGLIKCGRGRWTKIARHFLSNKTPQQVQGYANSYFRNLPSTHFYSFRRRNSAYSTVSFLAAGNNLIGGASSASSYNMPKSVITANNNSNNDNNEPIKKTLMLFPEKLGPSSFFQFQPLIGEASTTATTKNNNNHNYAYYGSFQMQTIGAGITSSMNASGNYEQVDLELRLGRSQ* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0080 333 SMART sant 146 196 IPR001005 -
Dod05g0080 333 MobiDBLite consensus disorder prediction 1 20 - -
Dod05g0080 333 CDD SANT 149 194 IPR001005 -
Dod05g0080 333 PANTHER MYB-LIKE DNA-BINDING DOMAIN PROTEIN 75 330 - -
Dod05g0080 333 ProSiteProfiles SANT domain profile. 145 198 IPR017884 -
Dod05g0080 333 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 75 330 - -
Dod05g0080 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 147 198 IPR017930 -
Dod05g0080 333 Pfam Myb-like DNA-binding domain 147 193 IPR001005 -
Dod05g0080 333 Gene3D - 148 198 - -
Dod05g0080 333 ProSiteProfiles Myb-like domain profile. 147 194 IPR001005 -
Dod05g0080 333 SUPERFAMILY Homeodomain-like 149 197 IPR009057 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod05g0080 Myb_DNA-binding 8.5e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0080 - - gmx:102663307 208.379