Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0069 ATGAAAGAGACATGCACCACAGTTTCATGGACTTTCCGAGGATTTTATGAGAAGGCACTTCTTGATTATGAAAGGCATAAAACACAAGTTGGTGAGGTGAATCTGCCTATTGCTTCTATTTCAGAGCCTACAAATATTGAAAATCAGGCTGCAGCATCAGGTAGAGCACGGAGAGATGCTGCAGCAAGAGCTATGCAGGGCTGGCACTCACAGCGCCTCCTTGGTAATGGTGAAGTTAATGATCCTATTATTAAGGAAAAGAATTCTTTGTCTTTGCAAAGGCGCGAAAAGCAGCTTAAAAGCATCAATTTACTTAAGCGTAAGAAACCATCTTACATGGACAACACAGTCAAAGCAGCACGTAGTAAACCATCTAAACCACAATTGGAGACATCTGTGATTGATATTGGACCTCCTGCTGATTGGGTAAAAATTAATGTGCAAAAAACTAAAGATTGTTTTGAGGTCTATGCCTTAGTTCCTGGCCTTCTACGGGAAGAGGTTCGTGTTCAATCAGACCCTGCAGGACGCTTGGTCATAAGTGGTGAGCCTGAGCATCCTGATAATCCCTGGGGTGTTACTCCTTTCAAAAAGGTTGTCAGCTTGCCATCAAGAATTGACCCTCATCAGACATCAGCAGTGGTGACCCTGCATGGGCAACTGTTTGTTCGTGTCCCATTTGAGCAATCAGAATAA 696 0.4325 MKETCTTVSWTFRGFYEKALLDYERHKTQVGEVNLPIASISEPTNIENQAAASGRARRDAAARAMQGWHSQRLLGNGEVNDPIIKEKNSLSLQRREKQLKSINLLKRKKPSYMDNTVKAARSKPSKPQLETSVIDIGPPADWVKINVQKTKDCFEVYALVPGLLREEVRVQSDPAGRLVISGEPEHPDNPWGVTPFKKVVSLPSRIDPHQTSAVVTLHGQLFVRVPFEQSE* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0069 231 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 4 230 IPR045147 GO:0006357
Dod05g0069 231 Gene3D - 114 231 IPR008978 -
Dod05g0069 231 Pfam Hsp20/alpha crystallin family 148 230 IPR002068 -
Dod05g0069 231 SUPERFAMILY HSP20-like chaperones 140 227 IPR008978 -
Dod05g0069 231 CDD ACD_sHsps-like 146 226 - -
Dod05g0069 231 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 6-LIKE 4 230 - -
Dod05g0069 231 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 131 231 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0069 Dod-Chr5 1033140 1041959 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0069 4 229 ARID Transcription Factor Family AT1G76510 65.801 1.08e-95 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0069 - - gmx:100791081 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0336 02 4605993 4618500 Dod05g0069 05 1033140 1041959 PCT