Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0060 ATGATGGGAGGAGGAGGAGTTTGGGGGAACAACATTAACATTAACATTAACAGCAACAGCAACAGCAACGGCAACGGCAACAACGAGATATGGAAGGCACACACGGCGATGGTGATGGTGCAGGTGTTCAACGGAGGGTACCATGTAATTACGAAATTAGCCCTGAACGTTGGGGTCAACCAGATCGTGTTCTGCGTCTTCCGCGATCTCCTTGCCCTCTCCATCCTCGCTCCCCTCGCCTTCTTCCGTGAACGACGTACCCGGCCACCCATAACCAAACGCCTCTTGCTATCTTTCTTCTTTCTTGGATTAACTGGGATATTTGGCAACCATCTCTTATTTCTTATTGGTTTAAGCTATACTAATCCAACTTATGCTGCTGCAATACAACCAGCAACTCCAGTATTTACATTTCTGTTGGCTGTAATGATGGGTACAGAAAGAGTGAACCTGCTAAGGTACGAGGGTCTGGCCAAGGTTGGAGGAACTCTTATCTGTGTTTCGGGGGCTGTATTGATGGTTCTGTATCGTGGTCCAGCATTGATAGGATATACAGAGATGGACTTTGTTGCACAAAGTGAAATAAGTGCCAAAGGTCAACCAGAGCCTTCTGGATGGTTAATTGGAGGTTTAATGGATCTTGGATTGGACCATTTTCATCTTGGGGTACTGTGCTTTATAGGGAACTGTTTGTGCATGGCTGCTTTTCTTGCCATTCAGGCACCATTATTAAAAAAGTATCCTGCAAACCTATCTGTCACAGCATATTCATACTTCTTTGGAGCTTTACTGATGGTGACCACTTCAATTTTCGTGACTAGTGAGCCAACTGATTGGAGATTGACGCAATCTGAAACAATTGCCGTTATTTATGCTGGAATTATTGCATCTGCCCTTAATTATGGACTCATTACATGGTGCAACAAGATCTTGGGGCCAGCAATGGTTGCCCTTTATAATCCACTTCAACCTGGGGCTTCTGCTCTCCTCTCTAGAATTTTCCTTGGAAGTCCAATTTACATGGGAAGCATCATTGGGGGAACTTTAATCATTACTGGTCTGTATGCTGTTACTTGGGCATCATATAGAGAAAGACAAACAGCTGCTGGAGTTATTCCTCTTGGCTCTTGGGTCTCTGATGACAAGAGTTCATACCAGAGAGGTCTCATTTTCTCAGGTCCCACCAACTTATCCCCAAAACCTTCTGATTAA 1212 0.4455 MMGGGGVWGNNINININSNSNSNGNGNNEIWKAHTAMVMVQVFNGGYHVITKLALNVGVNQIVFCVFRDLLALSILAPLAFFRERRTRPPITKRLLLSFFFLGLTGIFGNHLLFLIGLSYTNPTYAAAIQPATPVFTFLLAVMMGTERVNLLRYEGLAKVGGTLICVSGAVLMVLYRGPALIGYTEMDFVAQSEISAKGQPEPSGWLIGGLMDLGLDHFHLGVLCFIGNCLCMAAFLAIQAPLLKKYPANLSVTAYSYFFGALLMVTTSIFVTSEPTDWRLTQSETIAVIYAGIIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGSPIYMGSIIGGTLIITGLYAVTWASYRERQTAAGVIPLGSWVSDDKSSYQRGLIFSGPTNLSPKPSD* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0060 403 PANTHER WAT1-RELATED PROTEIN 31 395 - -
Dod05g0060 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 272 363 - -
Dod05g0060 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 68 176 - -
Dod05g0060 403 Pfam EamA-like transporter family 221 358 IPR000620 GO:0016020|GO:0016021
Dod05g0060 403 Pfam EamA-like transporter family 37 158 IPR000620 GO:0016020|GO:0016021
Dod05g0060 403 PANTHER WAT1-RELATED PROTEIN 31 395 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0060 Dod-Chr5 917409 924437 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0060 116 370 Nodulin-like Gene Family AT5G45370 68.235 3.00e-127 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0060 - - gmx:100809051 657.907