Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0059 ATGACTGATCCTCATAATTCTGCTGTCCTTTCCAACCCCATAAAAACCATTGATCAACAATCTTTACGAAAACTCACTACGTACCCCATAACTTTGAAGTTTGAGGAATTGGTGTACAAAGTTAAAGTAGAGCAGAAAGGTCTATGTTGGGGTAGCACAGCATGGAGTCCAAGAGAGAAGACCATATTGAATGGTGTTACAGGTATGGTTTGTCCAGGTGAAATATTGGCTATGCTGGGGCCATCAGGCAGTGGCAAAACCACACTCCTCACAGCACTAGGAGGGCGCCTCAGTGGTAAACTATCAGGAAAAGTCACATACAACAACCAGCCTTTTTCAGGTACCATAAAAAGAAGAACAGGTTTTGTGGCACAAGATGATGTGCTATATCCTCACCTCACTGTTACTGAAACTCTAGTCTTCACTGCACTTTTAAGGCTTCCCAATAGCTTGACCAAAGATGAGAAAGTTCAGCATGTGGAGCAAATAATCAATGAGCTAGGACTAAGTAGGTGCAGGAGTAGCATGATTGGAGGGCCACTTTTTAGAGGGATATCAGGTGGGGAGAGAAAGAGGGTGAGTATAGGCCAGGAAATGCTCATCAATCCAAGCCTTTTGCTGCTTGATGAGCCAACCTCAGGTTTGGACTCTACAACTGCTCAGAGGATATTGAACACAATCAAAGGTTTGGCTAGTGGGGGTAGGACTGTCGTCACCACCATTCATCAACCTTCTAGCCGCCTCTACCATATGTTTGATAAGGTGGTCTTGCTCTCAGAAGGGTGTCCAATCTACTATGGCCCTGCTTCAACTGCCATGGAGTACTTCTCATCTGTTGGTTTTTCCACATCCTTGACTGTCAATCCGGCTGATTTTTTGCTTGATCTTGCTAACGGGATTGCCCCGGATTCGAAGAATGCTATTGAGAAAGGTGAGAGCCAGGAACCAGAAAAAAAGTCAGTGAGGGAAGCTCTCATCTCGGCTTATGAAAAGAATCTAGCAACAAGGCTGAAATCTGAGCTTTGCAGCTTGGATATGAACAACTACAATATGACAAAAGATGCTTATGCAATTGATGCCGGAAAGCACATAATAAGACATGAGCAATGGTGTACAAGTTGGTGGCATCAGTTCAAGGTGCTGTTGCAAAGGGGTGTGAGGGAGAGAAGGTATGAAGCCTTCAACAGGCTGAGAATATTCCAAGTCGTAAGTGTCGCTTTCCTTGGTGGACTCTTGTGGTGGCACACACCAGAATCACACATTCAAGACCGGATAGCTCTGCTGTTTTTCTTCTCTGTTTTCTGGGGATTCTACCCTCTCTACAATGCTGTCTTCACATTCCCTCAAGAGAGAAGGATGCTGATCAAGGAAAGGTCATCAGGGATGTACAAGCTCTCTTCCTACTTCCTTGCTAGAACCATAGGAGACTTGCCATTGGAACTTGCACTTCCAACTGCATTTGTCATCATAATATACTGGATGGGTGGCCTTAACCCTCACCCTTTGACTTTCATCCTTTCCCTCCTTGTGGTTCTTTATAGTGTCCTTGTCTCTCAAAGTCTTGGCTTAGCATTTGGTGCCATCTTGATGGAGGTTAAGCAGGCCACAACTTTAGCTTCTGTTACAACCTTTGTGTTTTTAATAGCCGGTGGCTACTATATACAGCATATCCCTCCCTTCATAGAGTGGACAAAGTACTTGAGCTATAGCTACTATTGTTACAAGCTCCTTCTTGGGGTGCAGTACAATGAGGATGATTATTATGAGTGCTCAAAGGGGGTCTTGTGCAGGGTCGGAGATTTTCCTCCTATCAAATCAATGGGGTTCAATCATACGTGGGTTGACGTGTGTATTATGGCCCTTATGTTGGTGGGCTATAGACTAGTTGCATATTTAGCACTGCAGAGAGTGAAGTAG 1917 0.4455 MTDPHNSAVLSNPIKTIDQQSLRKLTTYPITLKFEELVYKVKVEQKGLCWGSTAWSPREKTILNGVTGMVCPGEILAMLGPSGSGKTTLLTALGGRLSGKLSGKVTYNNQPFSGTIKRRTGFVAQDDVLYPHLTVTETLVFTALLRLPNSLTKDEKVQHVEQIINELGLSRCRSSMIGGPLFRGISGGERKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRILNTIKGLASGGRTVVTTIHQPSSRLYHMFDKVVLLSEGCPIYYGPASTAMEYFSSVGFSTSLTVNPADFLLDLANGIAPDSKNAIEKGESQEPEKKSVREALISAYEKNLATRLKSELCSLDMNNYNMTKDAYAIDAGKHIIRHEQWCTSWWHQFKVLLQRGVRERRYEAFNRLRIFQVVSVAFLGGLLWWHTPESHIQDRIALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYKLSSYFLARTIGDLPLELALPTAFVIIIYWMGGLNPHPLTFILSLLVVLYSVLVSQSLGLAFGAILMEVKQATTLASVTTFVFLIAGGYYIQHIPPFIEWTKYLSYSYYCYKLLLGVQYNEDDYYECSKGVLCRVGDFPPIKSMGFNHTWVDVCIMALMLVGYRLVAYLALQRVK* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0059 638 CDD ABCG_EPDR 29 267 - -
Dod05g0059 638 ProSitePatterns ABC transporters family signature. 185 199 IPR017871 GO:0005524
Dod05g0059 638 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 32 285 IPR003439 GO:0005524
Dod05g0059 638 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 17 636 - -
Dod05g0059 638 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 278 IPR027417 -
Dod05g0059 638 Pfam ABC-2 type transporter 242 307 IPR043926 GO:0140359
Dod05g0059 638 Pfam ABC-2 type transporter 377 582 IPR013525 GO:0016020|GO:0140359
Dod05g0059 638 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 17 636 - -
Dod05g0059 638 Pfam ABC transporter 63 213 IPR003439 GO:0005524
Dod05g0059 638 SMART AAA_5 72 262 IPR003593 -
Dod05g0059 638 Gene3D - 52 279 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0059 Dod-Chr5 881335 885208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0059 62 261 Calmodulin-binding Proteins AT2G36910 28.571 8.21e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0059 K05681 - gmx:100794774 1075.46