Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0056 ATGTGGTTCTTTGGATTCTCTACTAAATTTCCTAGCAACTTATGGACCATTGGTGCCATTTTGTTGGTGATCCTTGTAACTTTGTTATTAAAGAAGATTTTAGTTCATCTTGAGGCTCAAAAAGCAAAGAGTGCCCATAATTTGCATGTCAAGAAAGAAGGTGGTGAACAATATCGTGAGACTTTGAAGAGCATTGCTATTGCGAGGACATATGCATTGGAAGAGTTGAGGGTGGCCACAAGGTACTTTAGTGTCCAAATAGGTGTTGGAGCCACTTCTAAAGTGTACCTTGCAGAGCTTGGAGATGGGAGATTTGGGGCTGTGAAGAGAGTGATGGAGGAGAGAGGTGGGAGCAAGAAGATGTTCTTGGATGAAGTATCTGTACTACTCAGGATTTCACACCCAAATTTGGTTGGGTTAATGGGCTTCTGCATGGAGAAAGGAGAGCAACTTCTACTACTTGAGTATATACCAAACAAGAGCCTCTTTGAAAGGATGCACACATATGAAGGCCAACGTTCAGGAATACTCTCATGGCCCAGCCGTTTGAGCATTGCATTGGACATAGGCAGAGCCCTTAATTACCTTCACTTCCAAGCTGATCCACCCATCATACACAGAGATGTCAAGTCCTCCAATATCCTCTTGATTGATGATATGCATGCAAAGCTTGCAGACTTTGGGCTTTGCAAATTGGGCTGTGAAAACATTAATGGGCCACAGGCACCAACAATAGTCAAAGGCTCATTGGGCTACATTGACACTCATTATCTCCAAACAGGCCTTGTGTCAATCAAGAGTGATGTTTATAGTTTTGGGGTGCTTTTACTTGAGCTAATTACTGGGCTTAAATCCACACAAGGCTCTGTGACACTGGCAGAGTGGACACATGAGTTCAGGAACAATGAAGATATTGAGGTGATTGCCAAAATGTTGGACCCAAAACTAAATGGTGCTGCAAATTTAAAGCAAGTTAGGGTGTTGGTTAATGTAGCCAATGCAGCTTTGCTTGAAGATTTTGATGCAAGACCAGACATGAACCACATTGTAGATACAATTTCCAGTTGTATGTAA 1074 0.4227 MWFFGFSTKFPSNLWTIGAILLVILVTLLLKKILVHLEAQKAKSAHNLHVKKEGGEQYRETLKSIAIARTYALEELRVATRYFSVQIGVGATSKVYLAELGDGRFGAVKRVMEERGGSKKMFLDEVSVLLRISHPNLVGLMGFCMEKGEQLLLLEYIPNKSLFERMHTYEGQRSGILSWPSRLSIALDIGRALNYLHFQADPPIIHRDVKSSNILLIDDMHAKLADFGLCKLGCENINGPQAPTIVKGSLGYIDTHYLQTGLVSIKSDVYSFGVLLLELITGLKSTQGSVTLAEWTHEFRNNEDIEVIAKMLDPKLNGAANLKQVRVLVNVANAALLEDFDARPDMNHIVDTISSCM* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0056 357 SMART serkin_6 81 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0056 357 SUPERFAMILY Protein kinase-like (PK-like) 67 351 IPR011009 -
Dod05g0056 357 Gene3D Transferase(Phosphotransferase) domain 1 157 357 - -
Dod05g0056 357 Gene3D Phosphorylase Kinase; domain 1 41 156 - -
Dod05g0056 357 ProSiteProfiles Protein kinase domain profile. 81 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0056 357 PANTHER OS01G0253100 PROTEIN 5 357 IPR045271 GO:0004714|GO:0006468
Dod05g0056 357 Pfam Protein kinase domain 85 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0056 357 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Dod05g0056 357 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 5 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0056 Dod-Chr5 842381 844130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0056 68 353 Receptor kinase-like Gene Family AT1G79620 41.237 9.34e-56 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Dod05g0056 Pkinase 3.4e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0056 - - tcc:18606914 473.011