Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod05g0045 | ATGTCTTGTATGCCTTCCAACATCAACCTTGATGAATGGCATCAAACAAGCATTCCCATCGTTGCATCCAGAGCTGATAGCAGCTCCGTTCATGCATCTTCAGATGATTCCTTGAACCCTTCAAGCCGATTCCTTTCTCAGTTTAGCCTCATTCCTGGTAATATAAGCAGTAGACTTAGCAGAACCACCGGTTTGGGGTCATCAAGGCCTTGTCCTGTTTCTTCTTCAAGTCTCTCACTATTTGACGATGAAGATGAGCTTAATCAACAGGATCCAGGACCTACTGGCAATATGATTAACAGAAATGACACTCTGCAATGTAGTGGCCTACTTCCTACGTCTTTTGTGAATCAAATGCCTAAACAGTGTCATGAAGACACTTCTAATAATTTACGGTCAAGCTCAAACACCATAGCATCGGGTTTGTTTGGCATCTTGCACAGCAATCCCACAGATGGAGTTGGTACAAGAGAAGGGCTGGATGTGAATGTATTTTCTCCAAGAATTTTGCCTGAGACAGAAAATAGTCATACTAGACATACAGATCGACGAAATGGAGCTCAAGAACCAGTTGATCGGAATGTTCATTTTGGCCGAGCTTTAAGTGTTGGAAGGCTTCGCAATCGATTTTTTCGCAGATCAACATTACCTGACCTAACCTTTTGCCCTCCACAACAAGAGGGAGAAGTGAGAGATGCTGGTCCGGATACTGGAAGATATGCCGAGGAGGGGGATTCAAGAATGTTACCATCTGATCGCAATTCTCCTTCTACATCTGGATATCCTATAGCCAGTATGTCTAGCTCTGTGTTTAGCATCCATGACTATGAGGTTGAGACTTCAAGATCAAGAGAAAGTAGGTATCAGGATCTACTGGAACATAGGTCCAATTTCCTTGAACGGAGAAGAAGAATACGATCCCAGGTCCGTGCTCTTCAGCGGATGGGTAGCCGGTTTGAAAATCATTCTGGACATGACAGATCATGTATCTTGTCTGGTCAACATAGAAATGGATCTTGTACATGCCGAATCAGTAACCCTGACACCAATTCAAATGATGATACTAGTGCTAGAGGTAGCATATCAAGAATTGTTATGCTAGCAGAAGCCTTATTCGAGGTTCTGGATGAAATTCACCTGCAATCTGTGCTGTTATCTTCCCGGCCATCCGCATCTTCTATCGGATCTGTACCTGCACCAAATGAAGTTGTGGAGTCCTTACCTGTCAGACTATATACGAAGTTGCATAATCATCAAGAAGATGCTGCACAATGCTATATATGCCTTGTCGAGTATGAGGATGGAGACAGTGTGCGAGTACTGCCTTGCCATCATGAATTTCATAGAACATGTGTGGATAAGTGGCTGAAGGAGATTCACAGGGTATGTCCACTATGCCGGGGGGACATCTGCATATCTGATTCACAGCCAACAGAAAACTCAAGTGGCTAG | 1452 | 0.438 | MSCMPSNINLDEWHQTSIPIVASRADSSSVHASSDDSLNPSSRFLSQFSLIPGNISSRLSRTTGLGSSRPCPVSSSSLSLFDDEDELNQQDPGPTGNMINRNDTLQCSGLLPTSFVNQMPKQCHEDTSNNLRSSSNTIASGLFGILHSNPTDGVGTREGLDVNVFSPRILPETENSHTRHTDRRNGAQEPVDRNVHFGRALSVGRLRNRFFRRSTLPDLTFCPPQQEGEVRDAGPDTGRYAEEGDSRMLPSDRNSPSTSGYPIASMSSSVFSIHDYEVETSRSRESRYQDLLEHRSNFLERRRRIRSQVRALQRMGSRFENHSGHDRSCILSGQHRNGSCTCRISNPDTNSNDDTSARGSISRIVMLAEALFEVLDEIHLQSVLLSSRPSASSIGSVPAPNEVVESLPVRLYTKLHNHQEDAAQCYICLVEYEDGDSVRVLPCHHEFHRTCVDKWLKEIHRVCPLCRGDICISDSQPTENSSG* | 484 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod05g0045 | 483 | SUPERFAMILY | RING/U-box | 403 | 473 | - | - | |
Dod05g0045 | 483 | CDD | mRING-H2-C3H2C2D_ZSWM2 | 424 | 467 | - | - | |
Dod05g0045 | 483 | SMART | ring_2 | 425 | 466 | IPR001841 | - | |
Dod05g0045 | 483 | Pfam | Ring finger domain | 424 | 467 | IPR001841 | - | |
Dod05g0045 | 483 | MobiDBLite | consensus disorder prediction | 173 | 190 | - | - | |
Dod05g0045 | 483 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 482 | - | - | |
Dod05g0045 | 483 | MobiDBLite | consensus disorder prediction | 232 | 249 | - | - | |
Dod05g0045 | 483 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 387 | 472 | IPR013083 | - | |
Dod05g0045 | 483 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 482 | - | - | |
Dod05g0045 | 483 | MobiDBLite | consensus disorder prediction | 61 | 83 | - | - | |
Dod05g0045 | 483 | ProSiteProfiles | Zinc finger RING-type profile. | 425 | 467 | IPR001841 | - | |
Dod05g0045 | 483 | MobiDBLite | consensus disorder prediction | 171 | 193 | - | - | |
Dod05g0045 | 483 | MobiDBLite | consensus disorder prediction | 61 | 99 | - | - | |
Dod05g0045 | 483 | MobiDBLite | consensus disorder prediction | 221 | 262 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod05g0045 | Dod-Chr5 | 659434 | 663336 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod05g0045 | 155 | 474 | C3H Transcription Factor Family | AT5G45290 | 57.402 | 1.52e-108 | 331 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod05g0045 | - | - | gmx:100800896 | 649.047 |