Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0044 ATGGAGAGAACAAGAATCGTTCAACGGTTAAATCTTCTAGTATGTGTGTTGCTGTTGCTAAAGGCAGAAGGGTCTTTTGTTCCAATCACTTATTTGGAGAGTGCAGTATCAAAAGGAGCTGTTTGTCTGGATGGGAGTCCACCAGCCTACCACTTTGATAAGGGATCTGGAGAAGGGATTAGCAGCTGGATTGTTCACCTTGAGGGAGGAGGTTGGTGCAACGACGTCACTTCTTGCCTTTCTCGTAAGGACACTCGCCTAGGTTCATCTAGGCAAATGGATGAGCAAGTTGCCTTTTCTGGATTTTTAAGCGACCAGCAAAAGCATAATCCAGATTTCTACCATTGGAACAGAGTCAAGGTTAGATACTGTGATGGGGCATCATTTACTGGTGATGTGGAAGAAGTTGATCCAACAGCCAATTTGCACTTCAGAGGAGCAAGGGTTTTTGCTGCTGTCATTGAGGATTTACTAGCAAAAGGAATGCATAATGCTGAAAATGCTATTCTCTCTGGATGTTCAGCTGGAGGATTGGCTACTATATTGCATTGTGATCGCTTTAAAGATCTATTACCTTCAGGAGCTAACGTGAAATGCGTACCAGGATGCTGGTTATTTTATCAATGTGGGTCAGCAAAGAATTTGCCTTCATCCTGCGCTTCAAAACTCAGTCCTGAGCTGTGCTTTTTCCCGCAATACGTGGCATCAGAAATTAGTACACCAATCTTCATTGTAAACGCGGCCTATGATTCATGGCAGATTAAAAACATTTTGGCACCGGGCACTGCTGATCCCCATGGCAATTGGCGCAGCTGCAAGATTAATATAAAAGATTGCTCACCTGATCAACTGAGTTTGGTGCAAGGCTTCAGGATGGATTTCTTGAGGGCATTGAGTGTGATAGGGAACTCTCCATCTAAAGGAATGTTTATAGACTCTTGCTATGTCCACTGCCAAACAGAAATGCAGGAGACATGGTCTGAAAGTGATTCTCCGGTGCTCGCAAATACGACAATTGCAAAGGCAGTTGGAGACTGGTTTTATGGAAGAAATGCTTTCCGTGAGATAGATTGTGCTTTCCCTTGCAACCCTACTTGTGGTAACCGGGTTTTTGATCCACAAGCCCACCCGGGAATATAG 1140 0.4421 MERTRIVQRLNLLVCVLLLLKAEGSFVPITYLESAVSKGAVCLDGSPPAYHFDKGSGEGISSWIVHLEGGGWCNDVTSCLSRKDTRLGSSRQMDEQVAFSGFLSDQQKHNPDFYHWNRVKVRYCDGASFTGDVEEVDPTANLHFRGARVFAAVIEDLLAKGMHNAENAILSGCSAGGLATILHCDRFKDLLPSGANVKCVPGCWLFYQCGSAKNLPSSCASKLSPELCFFPQYVASEISTPIFIVNAAYDSWQIKNILAPGTADPHGNWRSCKINIKDCSPDQLSLVQGFRMDFLRALSVIGNSPSKGMFIDSCYVHCQTEMQETWSESDSPVLANTTIAKAVGDWFYGRNAFREIDCAFPCNPTCGNRVFDPQAHPGI* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0044 379 SUPERFAMILY alpha/beta-Hydrolases 141 252 IPR029058 -
Dod05g0044 379 PANTHER PECTIN ACETYLESTERASE 3 202 - -
Dod05g0044 379 PANTHER NOTUM-RELATED 3 202 IPR004963 GO:0016787
Dod05g0044 379 PANTHER PECTIN ACETYLESTERASE 209 374 - -
Dod05g0044 379 Pfam Pectinacetylesterase 21 352 IPR004963 GO:0016787
Dod05g0044 379 PANTHER NOTUM-RELATED 209 374 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0044 Dod-Chr5 653311 656648 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0044 5 379 Carbohydrate Esterase AT4G19420 55.814 3.90e-179 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0044 K19882 - gmx:100776802 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g0044 05 653311 656648 Dod02g0282 02 3785496 3790684 PCT