Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0043 ATGCATTGGTTAATCATTTTCTGTTTCTTGGATTCATGCAGAATCAAGAGCACAAGAATGGCCAAATGGTTAAGTCTTCTAGTTTGTGTGCTGCTGTTGTTGCTTAAGGCAGAAGGGGTTACTGTAGGAATCACTTATGTTCAAAGTGCGGTAGCAAAAGGAGCTGTTTGTTTGGATGGGAGTCCCCCAGCTTACCACTTTGATAAGGGGTCTGGAGCAGGGATTAACAACTGGATAGTTCACTTTGAGGGAGGAGCTTGGTGCAACAATGTCACTAATTGCCTTGCCCGTAGGGACACTCGTTTAGGTTCATCTAAGAAAATGGATCAAAAAAATTCCTTTTCTGGATACTTAAGTAACTCGAAAAAGTTTAATCCAGATTTCTACAACTGGAACAGAATCAAGGTTAGATACTGTGATGGTTCATCATTTACTGGTGATGTTGAAGCAGTTGATCCAAAAACCAATTTGCACTTCAGAGGAGCAAGGGTTTTTAATGCTGTCATTGAGGACTTACTAGCAAAAGGAATGAGAAGTGCACAAAATGCTATTCTTTCTGGTTGTTCAGCTGGAGGATTGACTGCTATATTACATTGTGATCGCTTTAAGACTCTAGTACCTGCAGGAACTAAAGTGAAATGCCTTTCAGATGCTGGCTACTTTATCAATGTAAAAGATGTCTCTGGAGCACAACACATTCAAGAGTTCTTCCGTCAAGTTGCTGAAACACATGGCTCAGCAAAGAATTTGCCTGCATCCTGCACTTCAAGACTCAGCCCAGGGCTGTGCTTCTTTCCACAAAATGTGGTATCACAAATCAGTACACCAATCTTCTTTGTAAATGCGGCATATGACTCATGGCAGATTAAGAACATTTTGGCCCCTGGTGTTGCTGATCCCCATGGCCAATGGCGTGACTGCAAGCTTGACATAAAGAAGTGCTCATCTGGTCAACTAAGTGTAATGCAAGGCTTCCGGACGGACTTCTTGAATGCAGTGAGTGCAGTAGGCAACTCTCCAGCCAGAGGAAAGTTCATAGATGGATGCTATGCACATTGCCAAGTTGGGACGCAAGAGACATGGATGAGAAGTGACTCCCCTGTGCTGGCCAAAACAACAATTGCAAAGGCTGTGGGAGACTGGTATTATGAAAGGAGGTCTTTCCATGAGATAGATTGCACTTACCCTTGCAACCCTACTTGCCATAACCGTGTTTTTGATTCCCAAGGCCATTCAGAAGATTAG 1245 0.4313 MHWLIIFCFLDSCRIKSTRMAKWLSLLVCVLLLLLKAEGVTVGITYVQSAVAKGAVCLDGSPPAYHFDKGSGAGINNWIVHFEGGAWCNNVTNCLARRDTRLGSSKKMDQKNSFSGYLSNSKKFNPDFYNWNRIKVRYCDGSSFTGDVEAVDPKTNLHFRGARVFNAVIEDLLAKGMRSAQNAILSGCSAGGLTAILHCDRFKTLVPAGTKVKCLSDAGYFINVKDVSGAQHIQEFFRQVAETHGSAKNLPASCTSRLSPGLCFFPQNVVSQISTPIFFVNAAYDSWQIKNILAPGVADPHGQWRDCKLDIKKCSSGQLSVMQGFRTDFLNAVSAVGNSPARGKFIDGCYAHCQVGTQETWMRSDSPVLAKTTIAKAVGDWYYERRSFHEIDCTYPCNPTCHNRVFDSQGHSED* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0043 414 SUPERFAMILY alpha/beta-Hydrolases 156 287 IPR029058 -
Dod05g0043 414 PANTHER PECTIN ACETYLESTERASE 17 409 - -
Dod05g0043 414 Pfam Pectinacetylesterase 36 386 IPR004963 GO:0016787
Dod05g0043 414 PANTHER NOTUM-RELATED 17 409 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0043 Dod-Chr5 641641 646700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0043 19 406 Carbohydrate Esterase AT4G19420 60.284 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0043 K19882 - gmx:100781246 677.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0282 02 3785496 3790684 Dod05g0043 05 641641 646700 PCT