Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0039 ATGGGCATTTTTCCAGTGAAATGGAAATGGCTATGGCTTCTTTGTGCTCTGATGATAAATATCGTGATCAATGAAAATGAGGCGATCAGTCCTGATGGGGAGGCACTAATCAGCTTCAGGACAGCAGTTATTAGCTCAGATGGTGTGCTGTTACGGTGGAGGCCAGAGGATCCCAATCCATGTAAATGGAAAGGAGTGAGATGTGATCCAAAAACCAAGAGAGTAACACATCTGTCCTTGTCTCACCATAAGTTAAGTGGGTCTTTATCACCTGATCTTGGGAAGCTAGAGCATCTGAGGGTTCTTGCTCTTCACAACAACAACTTCTATGGGACAATTCCACCAGAATTGGGAAATTGCACTGAATTGCAGGGATTATATCTGCAGGGTAATTACCTTAGTGGAATGATTCCAGGTGAAATAGGGAACCTTTCACAGCTTCAAAGTTTGGATATATCAAGCAACTCCCTCAGCGGAAATATACCAGCATTGCTTGGGAACTTGTATAATCTAAAAAATTTCAATTTATCATCCAATTTTCTGATCGGACCAATACCTTCTGATGATGTGCTTGCCAACTTTTCTGCAAGCTCCTTTGTTGGAAATCGTGGTTTGTGTGGACTGCAAATTAATATTACATGCAAAAATGATGGTTCACCTGGATCGAATCCTCAATCTCAAACCTCAGATAAAAATCGAAATGGAAAGAAGAAATATTCTGGCAGGCTGCTTATCAGTGCATCAGCAACTGTGGGTGCTCTACTTTCAGTGGCACTTATGTGCTTCTGGGGTTGTTTTCTCTATAAGAAGTTCGGTAAAAGGGACAGAATAAATCTGGCAATGGATGTCTGTGGAGGTGCATCGATCGTGATGTTTCATGGAGATCTACCATATTCATCAAAAGACATTGTTAAGAAACTAGAGACTTTGAATGAGGAGCACATAATAGGGATTGGGGGATTTGGAACAGTTTACAAGCTTGCAATGGATGATGGGAATGTATTTGCTTTGAAAAGGATTGTGAAGTTGAATGAGGGCTTTGATCGTTTTTTTGAGAGAGAGCTTGAAATTCTTGGAAGCATTAAACACCGTCACCTCGTGAACTTGAGAGGATATTGCAATTCACCTACATCAAAGTTGTTAATATATGATTACTTACCTGGGGGTAGTCTTGATGAAGCTCTTCATGAAAAATCTGAGCAACTAGACTGGGATTCACGCTTGAATATAATCATGGGAGCTGCTAAAGGGCTTGCCTACTTGCACCATGATTGCTCCCCCAGGATCATACACCGTGACATAAAATCAAGCAACATTTTGCTTGATGGCAACCTGGATGCTCGGGTATCTGATTTTGGACTCGCAAAACTTCTAGAGGATGAAGAATCTCACATCACCACTATTGTAGCTGGAACATTTGGTTATCTAGCTCCAGGTAAACAATGTAGAATGGGTATGCTGTTGGCAGTATTGTAA 1476 0.4112 MGIFPVKWKWLWLLCALMINIVINENEAISPDGEALISFRTAVISSDGVLLRWRPEDPNPCKWKGVRCDPKTKRVTHLSLSHHKLSGSLSPDLGKLEHLRVLALHNNNFYGTIPPELGNCTELQGLYLQGNYLSGMIPGEIGNLSQLQSLDISSNSLSGNIPALLGNLYNLKNFNLSSNFLIGPIPSDDVLANFSASSFVGNRGLCGLQINITCKNDGSPGSNPQSQTSDKNRNGKKKYSGRLLISASATVGALLSVALMCFWGCFLYKKFGKRDRINLAMDVCGGASIVMFHGDLPYSSKDIVKKLETLNEEHIIGIGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRHLVNLRGYCNSPTSKLLIYDYLPGGSLDEALHEKSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPGKQCRMGMLLAVL* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0039 491 PANTHER RECEPTOR-LIKE PROTEIN 55 4 478 - -
Dod05g0039 491 Pfam Protein kinase domain 312 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0039 491 Pfam Leucine rich repeat 98 157 IPR001611 GO:0005515
Dod05g0039 491 SUPERFAMILY L domain-like 30 197 - -
Dod05g0039 491 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 4 478 IPR031071 GO:0004672|GO:0005524|GO:0030244
Dod05g0039 491 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Dod05g0039 491 ProSitePatterns Protein kinases ATP-binding region signature. 316 342 IPR017441 GO:0005524
Dod05g0039 491 Gene3D Transferase(Phosphotransferase) domain 1 386 483 - -
Dod05g0039 491 SMART serkin_6 310 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0039 491 SUPERFAMILY Protein kinase-like (PK-like) 295 478 IPR011009 -
Dod05g0039 491 Gene3D Phosphorylase Kinase; domain 1 286 385 - -
Dod05g0039 491 Gene3D Ribonuclease Inhibitor 30 215 IPR032675 -
Dod05g0039 491 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Dod05g0039 491 ProSiteProfiles Protein kinase domain profile. 310 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0039 491 MobiDBLite consensus disorder prediction 217 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0039 Dod-Chr5 588301 601452 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0039 1 478 Receptor kinase-like Gene Family AT2G35620 72.803 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Dod05g0039 Pkinase 5.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0039 - - adu:107487087 842.802