Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0035 ATGGAGTCTGGTGAGGATGAGCGTTTGTCTGTTAGAGAGGTGCATGCAAATGGGAGCTGCATGAAGACAACAGAAGTTGAGGCCAAGCTTGACGAAGGCAACATTCAAGAAGCAGAAGCAGCATTGCGAGAAGGCTTGTCTCTCAATTTTGAGGAAGCCAGAGCTCTTCTTGGAAAGTTAGAGTATCAGAGAGGTAATGTAGAAGGAGCTCTTCGTGTGTTTGATGGGATTGATCTTCAAGCAGCCATACAGCGACTACAACCTTCCTTTTCTGAAAAGCCAAAGAAAGGTCCCTCTCGCACTGAATCACCTTCCTCGGTCTCTCAGCATGCTGCTAGTTTGGTGCTTGAAGCCATCTTTTTAAAAGCCAAGTCTCTACAAAAACTCAGGAAGTTTAATGAAGCTGCTAATGAATGCAAGCGTGTTCTTGATGCTGTTGAAAAGATATTTTATCAGGGTATACCTGATATTCAAGTGGACAATAAATTGCAAGAGATTGTCAGCCATGCAGTAGAGCTGCTTCCGGAGCTTTGGAAACAGGCTGGTTGCTATAGTGAGGCAATATCTGCTTATAGGCATGCCCTTCTTAGTCAATGGAACCTTGATAATGATTGCTGTGCGAGAATTCAGAAAGCATTTGCTGTGTTTTTGCTGTACAGTGGGGTGGAGGCAACTCCACCAAGTTTAGCAGTTCAGATTGAAGGCTCTTATGTACCCAAAAATAATCTGGAAGAGGCAATTCTTCTTCTAATGATTCTTTTAAGAAAGTTTTGCCTTGGTAAGACGAAATGGGATCCCTCAGTTATGGAACACCTGACATTTGCACTTTCAGCATGTGGCCAAACTTCTCTATTAGCAAAACAACTTGAAGAGTTGCTTCCTGGTGTATATCATCGAATTGACCGTTGGAACTCTTTAGCTCTGTGTCACAGTGCAGCTGGACAAAACAAAGTTGCTTTGAGTGTGCTGAGAAAGTCTTTGCACAAGCATGAACGACCGAATGACAGTATATCCTTGTTATTGGCAGCCAGGATTTGCAGTGAGGATCCTCACCTTGCTGCTGAGGGAGCAGGCTATGCACAGAGGGCAATCAATAATGCTCAAGGCCTAGATGAGCATTTAAAAGGCGTCGGTCTTCGGATGTTGGGACTTTGCCTTGGAAAGCAAGCTAAGGTTGCTTCCTCTGACTATGAGCGGTCTCATCTTCAAGCCAACGCTCTCAAATCATTGGAGGAGGCAGTTAGATTGGAGCAAAACAACTCTGATCTAATCTTGGAGTTGGCTGTTCAATACGCAGAGCACCGAAATTTGACTGCTGCTTTACGCTATGCCAAGCAGTTCTTTGATGAAACTGGTGGATCTGTATTGAAAGGTTGGATATTGCTGGCTCTAGTTTTGTCTGCACAAAAAAGATTTTCAGAGGCTGAAGTGGTGATTGATGCTGCTTTAGATGAGACTGCAAAATGGGAGCAGGGGCCACTACTCAGGCTGAAAGCGAAACTGAAGATCTCCCAATCACGACCCATGGATGCTATTGAAACTTATCGATACCTTCTTGCATTGGTTCAAGCCCAGAGGAAATCCTTTGGACCACTCAGAATTAGTTCACAGGTTGTGGATGATAAGGTTGATGAATTTGATGTTTGGCATGGTCTGGCAAATTTATATGCAAGCCTTTCTCACTGGAAGGATGCTGAGATCTGTTTGCAAAAGGCCAGAGAATTAAAGGAGTACTCAGCAGCAACAATACACACCCAGGGTATCATGTTTGACGGCCGCAGACAAAATCAAGAAGCTCTTGCCGCTGCTACCAACGCTGTCCTGACTGAATCAAACCATGTTCCAAGCAAGGTCTTGATGGGTGCTATGATGCTGAAAATGGGTTCAAAAGCTTTGCCTGCTGCTAGAAGCTTACTTTCTGATGCACTCAGAATTGAACCCACAAACCGCATGGCTTGGTATCACTTGGGATTGATGCACAAGAATGAGGGCCGAATCGCCGACGCTGCTGACTGCTTCCAGGCAGCTTCTATGCTTGAAGAATCAGATCCGATTGAGAGGTTCAGCACCATACTGTGA 2079 0.4478 MESGEDERLSVREVHANGSCMKTTEVEAKLDEGNIQEAEAALREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQPSFSEKPKKGPSRTESPSSVSQHAASLVLEAIFLKAKSLQKLRKFNEAANECKRVLDAVEKIFYQGIPDIQVDNKLQEIVSHAVELLPELWKQAGCYSEAISAYRHALLSQWNLDNDCCARIQKAFAVFLLYSGVEATPPSLAVQIEGSYVPKNNLEEAILLLMILLRKFCLGKTKWDPSVMEHLTFALSACGQTSLLAKQLEELLPGVYHRIDRWNSLALCHSAAGQNKVALSVLRKSLHKHERPNDSISLLLAARICSEDPHLAAEGAGYAQRAINNAQGLDEHLKGVGLRMLGLCLGKQAKVASSDYERSHLQANALKSLEEAVRLEQNNSDLILELAVQYAEHRNLTAALRYAKQFFDETGGSVLKGWILLALVLSAQKRFSEAEVVIDAALDETAKWEQGPLLRLKAKLKISQSRPMDAIETYRYLLALVQAQRKSFGPLRISSQVVDDKVDEFDVWHGLANLYASLSHWKDAEICLQKARELKEYSAATIHTQGIMFDGRRQNQEALAAATNAVLTESNHVPSKVLMGAMMLKMGSKALPAARSLLSDALRIEPTNRMAWYHLGLMHKNEGRIADAADCFQAASMLEESDPIERFSTIL* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0035 692 ProSiteProfiles TPR repeat profile. 650 683 IPR019734 GO:0005515
Dod05g0035 692 SMART tpr_5 580 613 IPR019734 GO:0005515
Dod05g0035 692 SMART tpr_5 650 683 IPR019734 GO:0005515
Dod05g0035 692 SMART tpr_5 116 149 IPR019734 GO:0005515
Dod05g0035 692 SMART tpr_5 456 489 IPR019734 GO:0005515
Dod05g0035 692 SMART tpr_5 300 333 IPR019734 GO:0005515
Dod05g0035 692 SMART tpr_5 546 579 IPR019734 GO:0005515
Dod05g0035 692 SUPERFAMILY TPR-like 404 505 IPR011990 GO:0005515
Dod05g0035 692 Gene3D Tetratricopeptide repeat domain 203 528 IPR011990 GO:0005515
Dod05g0035 692 PANTHER CALMODULIN-BINDING PROTEIN 1 691 - -
Dod05g0035 692 SUPERFAMILY TPR-like 117 332 IPR011990 GO:0005515
Dod05g0035 692 SUPERFAMILY TPR-like 30 445 IPR011990 GO:0005515
Dod05g0035 692 Gene3D Tetratricopeptide repeat domain 23 199 IPR011990 GO:0005515
Dod05g0035 692 SUPERFAMILY TPR-like 537 676 IPR011990 GO:0005515
Dod05g0035 692 PANTHER PROTEIN NPG1 1 691 IPR043376 -
Dod05g0035 692 Gene3D Tetratricopeptide repeat domain 532 688 IPR011990 GO:0005515
Dod05g0035 692 MobiDBLite consensus disorder prediction 88 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0035 Dod-Chr5 568324 572920 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0035 2 692 Calmodulin-binding Proteins AT2G43040 74.425 0.0 1021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0035 K21843 - gmx:100811897 1123.61