Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0029 ATGGAGAAAGCGAGGCCCTCAGATCAGGTTGTTGTCTTCATTGACCAACCTAACCCTAAACCTGCCTCTATGGACACTGAGAGTGCTGAAGCTAACCGTAATAATGAGAAGCCCAAAAAACCCTTGAGGGTCAAAACCCTTAACCGTCTCAGCTTCTCCAAACCCAAATCTAGAATCCTTGAATACAACTATCCACCCCTCACCAAACTAACACGAACCACCTCTGAGGAAAGTAACACTCACTCTTCTTCCTATAGGATCTCTCCCATTGATGAAGAAGACGACGACGACGATGATGAGTTGGAGTGGGACGAGGAAGAGATCGAGGAGGATGGAGGGGAGCAAGGTTCAAAGTTGCACCAAAGGAAGAAGAACAAGGTGAAGTGGAGGACTGTGGTTGAGTGGGGCTTGTTCCTGAACATATTAACTTGCTTAGTGTGTTCCCTCACAATAAGCTCGATCAAGAACATGCACTTGTTGGGCTTGGAAATTTGGAAGTGGTGCTTGATGGTTATGGTCACATTCAGTGGCCGTTTGGTTTCTGGGTGGCTAGTTGCTGTCGCAGTCTTCATCATAGAGAGGAACTTCATGCTCAGGGAGAAGGTTTTGTACTTCATCTATGGCCTCAGAAAGAGCATCAGGAACTGCTTGTGGCTAGGCCTTGTATTGCTCTCGTATTGGAGCGTGGTGTGCGATGATGTGCAGAAGAGGCACAAGTTTCTGGACAAGGTGTTTCAGGCACTGGTGGCAGTGTTGGTTGGAGCCACCATATGGCTTGTGAAGATTGTGCTGGTGAAGATGTTGGCCTCTTCGTTTCATGTCACAACCTACTTTGACAGGATGACAGAGAGCGTTTTCCATCATTATATTTTGGATACCTTGTCAGGTCCGCCAATGGAAGATGCCGAAGAGATATTGCAGCAGCACCATCTCGCAGGTTCAAAGTCGATGCCAGCGAGGTGGAAGCTGAAGGAGGCGAAGAACTCGAACAAGTCAAAGAAATTTGGGTCAAGGAGGATAGACATGGAGAAGCTGAAGGAGCTGAGCATGGAGAGCACAGCATCTGCGTGGGGAGTGAAGAGGCTTGTCAACTATGTCAGGTCTTCTGGCTTGACCACCATCTCCAGGACTATCGACGATTTCAGCAACGCTGAGTCTGAGATCAACAGTGAGTGGGAAGCTAGAAATTGTGCCCAAAGGATCTTCAAGAACGTTGCAAAACCTGCTGCCAAGTACATTGAAGAGGAGGATCTCATGAGATTTTTGAAGAGGGTTGAGATACATACCATATTCCCACTCTTTGAAGGTGCCCTTGAAACTGGCAAGATCAGCCGGTCTTCATTTAGAAACTGGGTGATCCGAGCTTATTATGAACGAAAAGCACTAGCGCAATCACTGAATGATACAAAAACAGCAGTGCAGCAGCTTCACAAACTAGCAAGCGCAGTTGTGAGCGTGATCATAATCATTGTGACACTGTTGGTGATGGGGGTGGCCACGCTCAAGATAATATTCTTCTGCATGACACAAATAGTTTTGATAGGGGTTGCCTTCCAAGGTACTTGCAAGACTGTGCTGGAGGCCATCATCTTTGTCTTTGTCATGCACCCTTTTGATATTGGAGACCGCTGCGTCATCGATGGTGTTCATATGATTGTGGAAGAGATGAATATCTTGACAACAGTGTTTCTCCGATATGACAATGAGAAAATATACTACCCTAATGCAGTTTTGCTCAATAAGCCAATAAGCAATTTCTATAGGAGTCCAGAGATGTGGGATACAATTGATTTTACCATTGATGTTTCAACTCCCATGGAGACTATCATTGCACTCAAGAAGTCAATACAAATGTACATTGAGAGCAAGCCAAAGTATTGGAATCCAAAGCACAGTGTGATAGCAAAAGGAATAGATAATGTGGACAAGCTGAATCTAAGCTTATGTGTGCAACACACCATCAACCATCACAATTATGGTGAGCGAAGCCTTAGGATATCTGAGCTCCTCTTGGAACTGAAAAAGATCTTTGAGATCCATGGTGTCAAGTACAACCTTCTTCCTCAGGAAGTCCACATTACCCGGATGAACTTTGAAAATGGGAGAGTTATGTTTCAATCATGA 2124 0.4529 MEKARPSDQVVVFIDQPNPKPASMDTESAEANRNNEKPKKPLRVKTLNRLSFSKPKSRILEYNYPPLTKLTRTTSEESNTHSSSYRISPIDEEDDDDDDELEWDEEEIEEDGGEQGSKLHQRKKNKVKWRTVVEWGLFLNILTCLVCSLTISSIKNMHLLGLEIWKWCLMVMVTFSGRLVSGWLVAVAVFIIERNFMLREKVLYFIYGLRKSIRNCLWLGLVLLSYWSVVCDDVQKRHKFLDKVFQALVAVLVGATIWLVKIVLVKMLASSFHVTTYFDRMTESVFHHYILDTLSGPPMEDAEEILQQHHLAGSKSMPARWKLKEAKNSNKSKKFGSRRIDMEKLKELSMESTASAWGVKRLVNYVRSSGLTTISRTIDDFSNAESEINSEWEARNCAQRIFKNVAKPAAKYIEEEDLMRFLKRVEIHTIFPLFEGALETGKISRSSFRNWVIRAYYERKALAQSLNDTKTAVQQLHKLASAVVSVIIIIVTLLVMGVATLKIIFFCMTQIVLIGVAFQGTCKTVLEAIIFVFVMHPFDIGDRCVIDGVHMIVEEMNILTTVFLRYDNEKIYYPNAVLLNKPISNFYRSPEMWDTIDFTIDVSTPMETIIALKKSIQMYIESKPKYWNPKHSVIAKGIDNVDKLNLSLCVQHTINHHNYGERSLRISELLLELKKIFEIHGVKYNLLPQEVHITRMNFENGRVMFQS* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0029 707 MobiDBLite consensus disorder prediction 90 112 - -
Dod05g0029 707 PIRSF Memb_At2g17000 14 705 IPR016688 -
Dod05g0029 707 SUPERFAMILY Sm-like ribonucleoproteins 528 586 IPR010920 -
Dod05g0029 707 MobiDBLite consensus disorder prediction 1 47 - -
Dod05g0029 707 Pfam Mechanosensitive ion channel 478 683 IPR006685 GO:0016020|GO:0055085
Dod05g0029 707 MobiDBLite consensus disorder prediction 68 86 - -
Dod05g0029 707 Gene3D - 537 586 IPR023408 -
Dod05g0029 707 MobiDBLite consensus disorder prediction 68 120 - -
Dod05g0029 707 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 4 705 IPR016688 -
Dod05g0029 707 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 4 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0029 Dod-Chr5 521917 530539 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0029 2 697 Mechanosensitive Ion Channel Family AT5G12080 41.944 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0029 K22048 - gmx:100813521 1093.95