Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0028 ATGTTTTCATGCATAACGTGTAACCCAGCTGCTAAAGAGAAGGACGAAGAAAATGAACGCCGAGAAAGTCGTAACCCAAGGCCTAAAGAACCCACCAAAAGCATTACTAAACAGCTAAAGGGTCTTGCACTGAAGGTCACAGGTTCTCACAGACAAAGCAAGCGTGGCAAAGAGTCAACTAGGTACCAGAGAAAACTTCCAGAGTCTGATAGTGAGTCAGAACATATTCCATCTTATGTTGGAGGTGGAAGCGGAGGTTCAACCCCTGTATGGGACATGACAGCCTATGAGCACGACCCTGCAGGTGAGAGCAGTACATTTGTTGCTGTCCCTACCCCTCCCAGAGCAGCATCAGCCAATGATGTCTGGGGAGAAGAGGAAGAGGAATATGAATCTCACGAGTGGCTGGCACATGTCGAGGAAGGGATAAACATCACCTTTGCCTCTCTTCCTACCGGAGGAAATGATCTCAGAAGAATCCGCTTCGGCCGAGAGATGTTCGATAGAGATCTGGCACAAAGATGGTGGATCGAGAACTACGACAGACTAAGGGAACTTTACAATGTGCAAAGTTTCAATCGACAAGCTGTTATCCCGCCTGCAGCAGGATCTGAGGATGAGCAAGAAGAAGAAAGTTCTCGTCTGTCAAGACTGACGTTTGAGCAAGAAGGGTCTGGGAGTTTGGTGAATGAAGCTGCTTCTGAAGCGTTGGATCAGGCTGCAATGATGGGGCAGCAGTTCAATGAAGGGTCATCATCATCCATGGCTGTGGAAGCTGCAGCAGCTGATGCACCAGCGACACTGACACCCTCCAACTCTTTCAGGATTGATCCCAACGCTAGCCGTGAGGTAGAATGGGTGGAGCAAGATGAGCCTGGTGTTTTCATCACTATCAAGAAGTCTGCTGATGGCACAAGGCAGATTCGCCGTCTTAGGTTCAGCCGGAAACGATTTGAGACGGAGGATGCCAAGAATTGGTGGTTGGAGAACAAGGCGAGAGTTGAAGCTCAATACCTTTGA 1020 0.4892 MFSCITCNPAAKEKDEENERRESRNPRPKEPTKSITKQLKGLALKVTGSHRQSKRGKESTRYQRKLPESDSESEHIPSYVGGGSGGSTPVWDMTAYEHDPAGESSTFVAVPTPPRAASANDVWGEEEEEYESHEWLAHVEEGINITFASLPTGGNDLRRIRFGREMFDRDLAQRWWIENYDRLRELYNVQSFNRQAVIPPAAGSEDEQEEESSRLSRLTFEQEGSGSLVNEAASEALDQAAMMGQQFNEGSSSSMAVEAAAADAPATLTPSNSFRIDPNASREVEWVEQDEPGVFITIKKSADGTRQIRRLRFSRKRFETEDAKNWWLENKARVEAQYL* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0028 339 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 339 IPR044532 -
Dod05g0028 339 ProSiteProfiles BRX domain profile. 133 188 IPR013591 -
Dod05g0028 339 ProSiteProfiles BRX domain profile. 284 339 IPR013591 -
Dod05g0028 339 MobiDBLite consensus disorder prediction 51 72 - -
Dod05g0028 339 MobiDBLite consensus disorder prediction 1 86 - -
Dod05g0028 339 MobiDBLite consensus disorder prediction 10 34 - -
Dod05g0028 339 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 339 - -
Dod05g0028 339 Pfam Transcription factor BRX N-terminal domain 22 54 IPR027988 -
Dod05g0028 339 Pfam Transcription factor regulating root and shoot growth via Pin3 133 187 IPR013591 -
Dod05g0028 339 Pfam Transcription factor regulating root and shoot growth via Pin3 284 338 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0028 Dod-Chr5 519073 520988 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0028 1 339 Major Intrinsic Protein MIP AT1G31880 41.926 4.53e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0028 - - gmx:100809782 248.44