Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0024 ATGAGAGGGACGACGAAGGAGAAGGTCGTGAGAGTAGGACGTACGCCAAGAACTAAAGAAGCCGCCAAAAGTTTCACTACACAGATAAAGGGTATTGCAGTGAGGATCTCAGGTAGTTACAAGCAATGCAAAGGCAGCACAAGGTCAAGCAGCTGCCAGAAAGGACATACAGATCACTCTGGTGTTGCCTCGGAGGGTGTAGGAGGTGTGACCTCAAGTTCAACCCCAGCAGCATGTGACATCACGGCCTCCTCTACAAGACCTGACTCATCAGCATCAGCCAGTAATGTAGAGCAAAATGAGTCTCAGGGTCAGTGGATTGCAGAGGTGGAGGAAGGGATACACATTACTTTTGTTTCTCTTCCTACTGGAGGAAATGTTCTCAAAAGAATTCGCTTCAGCCGAGAGAAGTTCGATAGAAATCTGGCTCAAAGATGGTGGATTGAGAATTACGAAAGAATCAAGGAACTTTTTACTGTCCAGAGATTCAATCTTAGCACTCCTGGAAGATCTGAAGATGAGAAACACCTAAATGAAAAATTGTCATCTGATTTGTTTTTCATCCACTGGATTCTGCATAATGCTTATTGCTTATCTAATTCAAGATTCAATCATATACCATACATAATTGTGATTGAACAGCAAGGAGAAGGTTCTCACTCAAGATTGACACTTTCAACGCTGGACTCTTCCAGAGATGAGCTTCCTCTAGGCAACACTATCTGCAGTGAATTGGAGGCAGAATGGGTAGAGCAAGATGAGCCTGGGGTTTTCATCACAATCAGGCAGTTAGCTGATGGGACAAGAGAGCTTCGACGTCTTAGGTTCAGTGAGCTTTATGCCGGCGACAAGCCTTCCAACATCAAGGTACAACAACATTTGGGTAAGAAACATACATTCAGTTGGTATCCTTGGGGCACTTTTACCTTGGAATCTATAGTGCTCCATTACCTATCTCATATCTTGTAA 969 0.4396 MRGTTKEKVVRVGRTPRTKEAAKSFTTQIKGIAVRISGSYKQCKGSTRSSSCQKGHTDHSGVASEGVGGVTSSSTPAACDITASSTRPDSSASASNVEQNESQGQWIAEVEEGIHITFVSLPTGGNVLKRIRFSREKFDRNLAQRWWIENYERIKELFTVQRFNLSTPGRSEDEKHLNEKLSSDLFFIHWILHNAYCLSNSRFNHIPYIIVIEQQGEGSHSRLTLSTLDSSRDELPLGNTICSELEAEWVEQDEPGVFITIRQLADGTRELRRLRFSELYAGDKPSNIKVQQHLGKKHTFSWYPWGTFTLESIVLHYLSHIL* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0024 322 MobiDBLite consensus disorder prediction 42 100 - -
Dod05g0024 322 MobiDBLite consensus disorder prediction 1 24 - -
Dod05g0024 322 Pfam Transcription factor regulating root and shoot growth via Pin3 105 156 IPR013591 -
Dod05g0024 322 Pfam Transcription factor regulating root and shoot growth via Pin3 246 278 IPR013591 -
Dod05g0024 322 MobiDBLite consensus disorder prediction 42 58 - -
Dod05g0024 322 MobiDBLite consensus disorder prediction 66 100 - -
Dod05g0024 322 ProSiteProfiles BRX domain profile. 104 159 IPR013591 -
Dod05g0024 322 Pfam Transcription factor BRX N-terminal domain 14 44 IPR027988 -
Dod05g0024 322 PANTHER PROTEIN BREVIS RADIX-LIKE 1 10 298 IPR044532 -
Dod05g0024 322 MobiDBLite consensus disorder prediction 1 18 - -
Dod05g0024 322 ProSiteProfiles BRX domain profile. 247 302 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0024 Dod-Chr5 488182 490814 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0024 3 303 Major Intrinsic Protein MIP AT1G31880 42.433 5.69e-67 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0024 - - mnt:21405645 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0382 02 5143076 5144362 Dod05g0024 05 488182 490814 PCT