Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0016 ATGGGTGCGGGAGGCCGTGCTGAGGAGGAGGAGGAGGAGGAGAAGAGGTGGCCGCGGTGGTTGAAGCCTCTGCTGAGAGAGAGCTTCTTTGTTCAATGCAAGGTTCACGCCCACTCCCACAAGAGCGAATGCAACATGTATTGCTTGGACTGTATCGACGGTGCTCTCTGCTCCCTCTGCCTCGCCAATTGCCACAAGGATCACCGTGCTATCCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTGAGTGAGATTCAGAAGGTGTTGGACATCGCAGGGGTCCAAACATACATCATCAACAGCGCAAGGGTGGTCTTCTTGAATGAGAGGCCTCAGCCAAGGCCTGGCAAGGGCGTCACCAACACTTGTCAAGTCTGCCACCGTAGCCTTCTCGATTCCTTCCTATTTTGCTCTCTCGCTTGCAAGATTGTTGGATCTTCAAGGGATTTCCAGAAGAAGAAGAAGAAGTCAGCGGCAATGGCTTCAGACTCAGAGGACGCATACAGCAGTAGCAGCAGCCATGGCAGGGTGAACAACAACAAGGTGCAGAGCTTCACTCCGTCGACACCACCCCCAACTTCAGTTAATTACAGAACGGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCAATGGGAGGGCTACTCATAGAATACTAG 666 0.5255 MGAGGRAEEEEEEEKRWPRWLKPLLRESFFVQCKVHAHSHKSECNMYCLDCIDGALCSLCLANCHKDHRAIQIRRSSYHDVIRVSEIQKVLDIAGVQTYIINSARVVFLNERPQPRPGKGVTNTCQVCHRSLLDSFLFCSLACKIVGSSRDFQKKKKKSAAMASDSEDAYSSSSSHGRVNNNKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLLIEY* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0016 221 MobiDBLite consensus disorder prediction 165 198 - -
Dod05g0016 221 MobiDBLite consensus disorder prediction 159 215 - -
Dod05g0016 221 Pfam PLATZ transcription factor 74 145 IPR006734 -
Dod05g0016 221 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 217 - -
Dod05g0016 221 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 4 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0016 Dod-Chr5 404212 406775 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Dod05g0016 PLATZ 4.3e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0016 - - mnt:21386756 348.977