Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod05g0014 | ATGGCGACTTCAAAATCAAGTTTCATCAGTGGGACTGTGTTAGCAGCAGCAGCAGCAGCAGCTGCAGCTCAATCTCATCATCATTCCTGTCCCCAAACCATAAACCTCCGCGGGGAGCGTGGTGTGTCGAGTCCTGTTGCTTCCCGCACCCGCAGGCTCACACTCTCTTCCAATTTCACAACAAGAACACGCCGCTTTCACCTCTTGTTCTGCCGCTCTGCTTTCCATTTGGAAGAGGAAGAGGAAAAGGTTCCACTTCCACCGCCACAACAACAACACACCACAAACCTCAGCAAGCTTTACGTCTGTAACTTACCATGGTCCCTCTCCCCCGCCCACATCAAATCCCTCTTTTCTCAATGCGGAACTGTTACCGATGTCCAGGTGATAAAGAACAAAAATGGGCGATTGACTGGCTTTGCCTTCGTTACCATGGCTTCTGGCGATCAGGCTCAGGCTGCAATTCGTAAATTTCATTCTCACCAAATATCAGGCCAGATGATAAGGGTAGAGCCTGCGAAGAGATTTAAGAAACCTCGTCCTCCAGGTCCCCCTTCTGATGAGACATGCCATAAAATTTTTGCATCCAATCTTGCCTGGAAAGTAAGATCTGGCCATCTCAGAGAATTCTTCACTGGGAATTTTAAAAAGCCAGTTTCAGCCAGGGTTGTGTTTGACAGCCCTTCTGGAAGATGTGCTGGGTATGGATTTGTTTCTTTTGTTACAGAGGAGGAAGCAGAGGATGCCATTTCTGCTTTGGATGGGAAGGAGTTAATGGGACGACCTGTTCGCCTAAAATTTAGCCGAAAGACCGTTGAAAAAGCTGGTAGTGACAAAGATGAGGAGCAAGGTTATGATGATCAATTGGAAGTTTCATAA | 879 | 0.4744 | MATSKSSFISGTVLAAAAAAAAAQSHHHSCPQTINLRGERGVSSPVASRTRRLTLSSNFTTRTRRFHLLFCRSAFHLEEEEEKVPLPPPQQQHTTNLSKLYVCNLPWSLSPAHIKSLFSQCGTVTDVQVIKNKNGRLTGFAFVTMASGDQAQAAIRKFHSHQISGQMIRVEPAKRFKKPRPPGPPSDETCHKIFASNLAWKVRSGHLREFFTGNFKKPVSARVVFDSPSGRCAGYGFVSFVTEEEAEDAISALDGKELMGRPVRLKFSRKTVEKAGSDKDEEQGYDDQLEVS* | 293 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod05g0014 | 292 | Gene3D | - | 177 | 282 | IPR012677 | - | |
Dod05g0014 | 292 | Gene3D | - | 72 | 176 | IPR012677 | - | |
Dod05g0014 | 292 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 191 | 270 | IPR000504 | GO:0003723 | |
Dod05g0014 | 292 | SMART | rrm1_1 | 99 | 171 | IPR000504 | GO:0003723 | |
Dod05g0014 | 292 | SMART | rrm1_1 | 192 | 266 | IPR000504 | GO:0003723 | |
Dod05g0014 | 292 | PANTHER | CHLOROPLAST, PUTATIVE-RELATED | 15 | 284 | - | - | |
Dod05g0014 | 292 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 193 | 263 | IPR000504 | GO:0003723 | |
Dod05g0014 | 292 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 100 | 168 | IPR000504 | GO:0003723 | |
Dod05g0014 | 292 | SUPERFAMILY | RNA-binding domain, RBD | 89 | 183 | IPR035979 | GO:0003676 | |
Dod05g0014 | 292 | CDD | RRM_SF | 100 | 171 | - | - | |
Dod05g0014 | 292 | SUPERFAMILY | RNA-binding domain, RBD | 179 | 274 | IPR035979 | GO:0003676 | |
Dod05g0014 | 292 | PANTHER | OS02G0815200 PROTEIN | 15 | 284 | - | - | |
Dod05g0014 | 292 | MobiDBLite | consensus disorder prediction | 270 | 292 | - | - | |
Dod05g0014 | 292 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 98 | 175 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod05g0014 | Dod-Chr5 | 384971 | 387437 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod05g0014 | 193 | 277 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 29.885 | 4.38e-06 | 46.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod05g0014 | - | - | rcu:8289087 | 260.766 |