LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod05g0008	ATGGCACCTTCATTCGATCGAAGTGCTAACACGGTTTGTGTAATGGACGCTTCGGGCCAGTTAGGTACCACTCTGCTCCAGCGATTACTACAGAGGGGTTACACTGTCCACGCCTCTGTTCAAACACATGGGCAAGAAGAGCGATTGAGTGGGATTTGTGCTGAACCCAATAAGCTCAAGATTTTCCGTTCCGACCCATTTGATTACCATAGCATAACCGATGCCCTCAATGGCTGCTCTGGCTTGTTCTACACATTTGAGCCACCGCAAGACCAGCTCAACTATGATGAAAACATGGCAGACGTTGAGGTGAGAGCTGCACACAACGTGCTTGAAGCTTGTGCTCAAACAGAAACCATACATAAGGTGATTTTCACATCCTCTGCAACCGCTGTCGTTTGGAGGGAAGATCGCAAGCGCATGGAATCGGACTTGGATGAAAGACACTGGAGTGATGTCAACCTGTGTCGTAAGTTGAAGCTATGGCATGGGATGTCAAAGACGGTGGCAGAGAAGACAGCTTGGGCACTGGCAATGGACAGAGGAGTGAACATGGTGTCCATCAACGCCGGCTTACTCATGGCCGTGGGTGATGCAAACGACTTGTGCATCAGCAACCCCTACCTACATGGGGCTGTCGAGATGTATGAGGATGGTGTCTTGGTCACCGTTGATTTGGGATTCTTGGCGGACGCCCACATCTGTGTCTACGAACATGTCTCATCCTACGGTCGCTATTTGTGCTTCAACCACATAGTCAACACTCGCGACCACGCCTTTGACCTCATCCGCAACCTATCGCCAGCCCCAGCCGCTGCCGCTCCTTCCTTTGCCTTACCTCAAAGCTGTGAGGAAGGTAAGGGTTTTACCCAGCAAAGAATAAGCAACAATAAGTTGAAAAGGCTGATGATGGATTTTGAGGGTTGA	927	0.5016	MAPSFDRSANTVCVMDASGQLGTTLLQRLLQRGYTVHASVQTHGQEERLSGICAEPNKLKIFRSDPFDYHSITDALNGCSGLFYTFEPPQDQLNYDENMADVEVRAAHNVLEACAQTETIHKVIFTSSATAVVWREDRKRMESDLDERHWSDVNLCRKLKLWHGMSKTVAEKTAWALAMDRGVNMVSINAGLLMAVGDANDLCISNPYLHGAVEMYEDGVLVTVDLGFLADAHICVYEHVSSYGRYLCFNHIVNTRDHAFDLIRNLSPAPAAAAPSFALPQSCEEGKGFTQQRISNNKLKRLMMDFEG*	309

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod05g0008	308	Gene3D	-	5	308	-	-
	Dod05g0008	308	PANTHER	NAD DEPENDENT EPIMERASE/DEHYDRATASE	6	307	-	-
	Dod05g0008	308	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	10	271	IPR036291	-
	Dod05g0008	308	PANTHER	CINNAMOYL-COA REDUCTASE-LIKE SNL6	6	307	-	-
	Dod05g0008	308	CDD	FR_SDR_e	12	303	-	-
	Dod05g0008	308	Pfam	NAD(P)H-binding	17	132	IPR016040	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod05g0008	Dod-Chr5	322189	326714	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod05g0008	11	306	Monolignol Biosynthesis Gene Families	AT5G58490	32.278	3.11e-41	144

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod05g0008	-		-	gmx:100793329	461.455