Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod05g0003 ATGCAGAAACAACAATACAGTACCATGGAACCTCGAAATGAGGATTTCCATCCTGCTTCTCGGTCAGTCCTGCAGGACCATCTCGATGGCATGCATATTCATACACGACCTTCTGCCTTTAATATGCCAGAAAGTAAACCCGTACTTAATTACTCCATACAGACTGGAGAGGAATTTGCTCTTGAATTTATGAGAGATAGGGTGAATCTGAGGAATCCCGTATTTCCAAATGTTGTGGGTGATCCCAGTTATTCAACAGGGTATATGGAATTGAAAGGCATTTTAGGCCACACAGGATCTGAAAGTGGGTCAGATATTTCTGTGCTCACAAAAGTCGAGAAGGGTCCAAAAGAGTTTGACAGAAGGAACTCTTCTCTGCACCAGGACAGAAGTAATTATGGTTTATCAATTCCTAGAACTTCATCTAATCAAGACAATAATCGAGTCCTTCATCGTATTGCCTCTTCTGGGGCATCTGACAGCTCATCAATGAAGATGAAAGTTCTCTGCAGCTTTGGTGGTAGAATATTACCACGCCCGAGTGATGGAAAGCTTAGATATGTCGGGGGTGAAACACGTATTATTAGTATAAGAAAGGACATAAGTTGGCAGGAGCTCATGCAGAAAACATCATCAATATATAATGAAACTCATGTAATAAAGTATCAACTCCCCGGGGAGGACCTTGATGCTTTAGTTTCAGTGTCTTCTGATGAGGATATGCGGAATATGATGGAGGAATGTCATGATCTACAAAGCAGAAGAGGATCACTAAAGCTTAGGATGTTTCTATTTTCTATAAATGATTTGGATGACACTCAGTTTGGTCTAGGTAGCATTGATGGTGATTCTGAAATCCAGTATGTAGTTGCTGTTAATGGCATGGACATGGGATCAAGAAGCAACTCTATTCTTCATGGTGCAAGCAGTTCTACTAATAATATACACGAGTTGGATGGACAGAATATTGGGAGGGAAACCAGCAGAGTTCTGAGCGAATCATTTGGCATCAGCAGTTCTTCCTTGGCAGGCAATTTTAAATCATCAATGACAATTCAGTCTTCGCAACCAATGGTGCCAACATCCTTGAATGCATCTGAAACCTATCCGTTGTTTTATGATAACCAGATCATTCACAGTGGCGAAACTAGTCAATATCCACTACGCCATGGTCTTGATTCTTCTGGAAGTGGTCTTGGAGACACTCTAGTTTCTGTGCCTACTCATGGTCTTGTTAACCAAGGAATTGTGAGTGAAGGGCAAGCATCCAATGAGTTGCAAGTACAAAATCTAGATATGTCAGCAATGCAGGTCAAGAGAAATGGTGATACCAATGACCCTATAAAAGTTTTCTCCTTGGAAGCACCATATCCTTTGCAATCCTTGGAAGGAAATTTGGAAGGTAATTTTTCAGAGCCATCAGTTACAGTTTCAGTGGCTGTATCAGAAAGGCATCATCCTGCACTGCCATTAAAAAACAATGGTAGGAACCAGCAGTCTGAAGAGGCTTCTTCATTGATCAGTACTATAAATCCTGCACAGACTTCTAAATCTGGTGAAGATGACCTCTCTACTACACCTACTGATGCATTCAGTCAAGCTCATGTGGATGCTGAGTCTGGTGTGATTGATATCAGTTGCCTTGAGCCATCTCCACTTCCCAACAGAGTCTATTATTCAGAGAGAATTCCCAGGGAGCAGGCAGATTTGCTGAACCGATCTACAAAGTCAGATGATGCATATGGTTCTCATTTGCTCATGTCAGATTTACTTTCTGATTTTAACCAGAAGAATTCAGTTAAAGAATCCAGTGACATGTCGCACAATGGGAATCTGTCAAATCTGAACACAGTGTCCAGATCAGCAGCAAAACCCTGGCATGTAGATGGCCATACCATTAATGATGAGTCTGTCCATCTACAAAAGTCCAAACAGTTGCCTGATGCAACAAATCAGGTGAATTCAAAGTTATCGCAGCTTGTGGATTCTGAGATTAAGCAGGTATTGGAAGATAATAAAGTTCCCAGAAAAGAGGAGCGGATGGTTACTTCTGAAAATGAAGTCAATCATACCATCGAAAGCCATGACCTTCTCGTAGTTGATGAAACCAACAGAATTGAACATCTTGCATTTCGCCAGGTTCCTTCTCTTGAACACAACGAGAATGCATCTAAACTACCAGACCTCAATTTGGGCGAGGTTTCTACCAGAGAATCCAATAATGATACTAAGGTCCAAGCACAGCCATTTGCTTTGGCTGGAAACACAAACCAAGATATTTCTCAAGATTTTCCCTTGGATTCCAAATCCATACCAGCTCAGGGTGACATTCTGATTGATATTGACGACAGGTTTCCCCGTGATTTCCTTTATGATATGTTCTCCAAAGCAATACTCTCTGAAGATTCATCAAACATTGGTCCATTATCAGCAGATAGAGCAGGTTTGAGCTTAAACATGGGCAATCATGAACCTAAACACTGGTCATATTTTCAGAAATTGGCCCAAGAGGGGTTTGATAATGCATCTCTAATTGATCAGGATCTTGGTTTTCCATCCAGCCAAATAAAAGTTCAAGAAGGGGATGGTCATTCTCAGCAATCTGCTCCTCTGCCAGTAGATAGTGTTTTAGCAGGACATAAGGAATCCCACCTGAATATTGTTGAAGAAAACCAGAAAAGCTTACCTGTAACAGCTAGAACAGAGGCCACTGTTTTTCTCAAAAGATATGAACATCCCCAAATTAAGGACAACGAAAATAAGAACAAGGATGTCATGGTGGAAAACATAAGACCACAAGACTCTGAATATCAGGATGGCAAGAATAAGACGAAGAATGTGGGTCTACCCCGACAAGATCCTTTTTTTGGGGATTTTGACATCAGTACTTTGCATTTGCAGCTTATAAAGAATGAAGATCTTGAAGAGTTGCGAGAACTGGGTTCTGGTACCTTTGGGACTGTGTATCATGGAAAGTGGCGGGGATCAGATGTTGCAATTAAAAGAATAAAGAAAAGTTGCTTCGCTGGTAGATCTTCTGAACAAGAGAGACTGACCATAGAGTTCTGGCGGGAAGCTGACATACTTTCCAAGCTTCACCATCCAAATGTGGTGGCATTTTATGGTGTAGTTCAGGATGGACCAGGAGCAACATTAGCCACTGTTACAGAGTACATGGTGGATGGTTCTCTTAGGCATGTTTTACTTCGTAAGGATAGGTATCTTGATCGTCGCAAGAGGCTGATAATTGCTATGGATGCTGCTTTTGGAATGGAATATTTACACTCAAAAAATATTGTGCATTTTGACTTGAAATGTGACAATTTGCTTGTGAACTTAAAGGATCCTTTAAGGCCTATATGCAAGGTTGGTGATTTTGGCCTGTCAAAAATTAAACGAAACACTCTGGTTTCTGGTGGTGTGCGGGGAACTCTTCCTTGGATGGCTCCAGAGCTGCTCAATGGTAGCAGCAATAAGGTTTCAGAAAAGGTTGATGTGTTCTCTTTTGGCATTGTATTATGGGAGATTCTTACTGGTGAAGAGCCATATGCTAATATGCACTACGGTGCAATCATAGGAGGTATTGTGAATAACACACTGAGGCCTACAATCCCCAGTTATTGTGATCTAGAGTGGAGAACACTAATGGAGCAGTGTTGGGCGCCTAACCCTGCAGCCAGGCCATCCTTCACAGAAATTGCTCGCCGCTTGCGTGCGATGTCAGCAGCTGCAAGTCAGACCAAGGGGCAAGGCCACAAGGCATCTAAATGA 3771 0.4182 MQKQQYSTMEPRNEDFHPASRSVLQDHLDGMHIHTRPSAFNMPESKPVLNYSIQTGEEFALEFMRDRVNLRNPVFPNVVGDPSYSTGYMELKGILGHTGSESGSDISVLTKVEKGPKEFDRRNSSLHQDRSNYGLSIPRTSSNQDNNRVLHRIASSGASDSSSMKMKVLCSFGGRILPRPSDGKLRYVGGETRIISIRKDISWQELMQKTSSIYNETHVIKYQLPGEDLDALVSVSSDEDMRNMMEECHDLQSRRGSLKLRMFLFSINDLDDTQFGLGSIDGDSEIQYVVAVNGMDMGSRSNSILHGASSSTNNIHELDGQNIGRETSRVLSESFGISSSSLAGNFKSSMTIQSSQPMVPTSLNASETYPLFYDNQIIHSGETSQYPLRHGLDSSGSGLGDTLVSVPTHGLVNQGIVSEGQASNELQVQNLDMSAMQVKRNGDTNDPIKVFSLEAPYPLQSLEGNLEGNFSEPSVTVSVAVSERHHPALPLKNNGRNQQSEEASSLISTINPAQTSKSGEDDLSTTPTDAFSQAHVDAESGVIDISCLEPSPLPNRVYYSERIPREQADLLNRSTKSDDAYGSHLLMSDLLSDFNQKNSVKESSDMSHNGNLSNLNTVSRSAAKPWHVDGHTINDESVHLQKSKQLPDATNQVNSKLSQLVDSEIKQVLEDNKVPRKEERMVTSENEVNHTIESHDLLVVDETNRIEHLAFRQVPSLEHNENASKLPDLNLGEVSTRESNNDTKVQAQPFALAGNTNQDISQDFPLDSKSIPAQGDILIDIDDRFPRDFLYDMFSKAILSEDSSNIGPLSADRAGLSLNMGNHEPKHWSYFQKLAQEGFDNASLIDQDLGFPSSQIKVQEGDGHSQQSAPLPVDSVLAGHKESHLNIVEENQKSLPVTARTEATVFLKRYEHPQIKDNENKNKDVMVENIRPQDSEYQDGKNKTKNVGLPRQDPFFGDFDISTLHLQLIKNEDLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFAGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGATLATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDLEWRTLMEQCWAPNPAARPSFTEIARRLRAMSAAASQTKGQGHKASK* 1257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod05g0003 1256 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1099 1111 IPR008271 GO:0004672|GO:0006468
Dod05g0003 1256 Gene3D Phosphorylase Kinase; domain 1 967 1061 - -
Dod05g0003 1256 CDD STKc_MAP3K-like 980 1237 - -
Dod05g0003 1256 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 81 1256 - -
Dod05g0003 1256 Gene3D Transferase(Phosphotransferase) domain 1 1062 1256 - -
Dod05g0003 1256 MobiDBLite consensus disorder prediction 492 527 - -
Dod05g0003 1256 SUPERFAMILY Protein kinase-like (PK-like) 957 1236 IPR011009 -
Dod05g0003 1256 ProSitePatterns Protein kinases ATP-binding region signature. 980 1005 IPR017441 GO:0005524
Dod05g0003 1256 SUPERFAMILY CAD & PB1 domains 181 272 - -
Dod05g0003 1256 Pfam PB1 domain 182 265 IPR000270 GO:0005515
Dod05g0003 1256 ProSiteProfiles Protein kinase domain profile. 974 1240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0003 1256 PRINTS Tyrosine kinase catalytic domain signature 1093 1111 IPR001245 GO:0004672|GO:0006468
Dod05g0003 1256 PRINTS Tyrosine kinase catalytic domain signature 1164 1186 IPR001245 GO:0004672|GO:0006468
Dod05g0003 1256 PRINTS Tyrosine kinase catalytic domain signature 1208 1230 IPR001245 GO:0004672|GO:0006468
Dod05g0003 1256 PRINTS Tyrosine kinase catalytic domain signature 1056 1069 IPR001245 GO:0004672|GO:0006468
Dod05g0003 1256 MobiDBLite consensus disorder prediction 117 141 - -
Dod05g0003 1256 Gene3D - 184 265 - -
Dod05g0003 1256 MobiDBLite consensus disorder prediction 487 527 - -
Dod05g0003 1256 CDD PB1_UP2 169 265 - -
Dod05g0003 1256 PANTHER SERINE-THREONINE PROTEIN KINASE 81 1256 - -
Dod05g0003 1256 SMART serkin_6 974 1243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod05g0003 1256 Pfam Protein tyrosine and serine/threonine kinase 975 1237 IPR001245 GO:0004672|GO:0006468
Dod05g0003 1256 SMART PB1_new 180 265 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod05g0003 Dod-Chr5 211857 219551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod05g0003 41 608 MAP Kinase Kinase Kinase AT1G16270 41.301 1.88e-105 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Dod05g0003 PK_Tyr_Ser-Thr 6.8e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod05g0003 - - gmx:100799118 1865.51