Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3225 ATGGGGTGGTGCAGCGAGGTTGTCTCGGTGTGGGGTGCAGTCCCGCTTGCTCTTGCTCTCGCTCCTACAGTTGCTGCTTCTGTCTGCAAGACAGACGGTTTCGTATACCAACTCCGAAAGCCTCTCTTCAAATTCAATAGCTTTTCTCCTCTCTCTCTTTCCCATCGGAAGTTGTTGGTAGTTCCCGCTACACCATCCTGCCGCGCACAATGCAGTGCTGCACAACCTTCAAGTTCTACTTCAAAGGATGGTTCTGATTTTGTGGTCGTCAATTTCTACCATTTTGTGTTTATAAAAGACCCACAAGCAGAAGTCACCAAAAATCTTTCCTTCTTGGAGGGCCTCCATCTTGACATCAAAGGAAGAGTCTATTTGAATGAACAAGGGATTAATGCGCAGTTTAGTGGACCATCTAAAGATGCTCTGTTATATGTCAACTGGTTGAGAGAGGATAACAGATTTTCAGAGACCTTGGTTCAGATATCTCCATCAGAAAATGGACACGCCTTTCCGAAATTGAAGTTGCGTTATAAGCCCTCATTAGTACAGTTTGAAGGTGGCATATCACATCTTCCTTTGCTTGATTCTTCAATGCGGGCAATAACTTTAGCACCTTCAGAATGGAGAAATATATTGCAACCAACAATGAAAAATGATCCTTCAAAAGAATTTCTGAACAGAAATTATATTCTACTGGATGTGAGAAATGGTTATGAATGGGATATTGGACATTTTCATGGTGCTCAACGACCTAATGTGGACTGCTTTAGAAGTACTTCATTTGGTCTTTCTCAAGAAGAGATCGCTGCTTCAGATCCTTTAACAAATGTAGATAAAGGAAAGGCCAACATATTGATGTATTGCACTGGTGGGATTCGCTGTGATGTATATTCTACCATACTAAGGCAGCAGGGATTTCAGAATTTGTATACCTTGAAGGGAGGTGTTTCTCACTATTTAAATAATGAAGGTCCTGCAGAATGGGTAGGAAATTTATTTGTATTTGACTCCCGTCTGTCTCTCCCTCCTTCTGTGTACTATCCCCAGGCCACAACTGAAGCAGAGATGACCCAAATTTCTGGGGTTAACAAGTTTGCAAAATGCTACATATGTAGTTTGGAAGTCAGTGAACTGAGGCATAGGAACTGTGCAAATCTTGACTGTAATTTGCTTTTTTTATGCTGTAGTAAATGTGTAAAGGACCTGAGGGGATGTTGTTGTTTGAGTTGCACTACTGCTCCTCGGCTTAGACCTGTTTTAAATGGAGATCAGAGATACAAAAAATGGCATATCTATCGTGATATGGATTTGCAAGGCAAGGAGTTAAAGTGTGCTTGA 1338 0.4155 MGWCSEVVSVWGAVPLALALAPTVAASVCKTDGFVYQLRKPLFKFNSFSPLSLSHRKLLVVPATPSCRAQCSAAQPSSSTSKDGSDFVVVNFYHFVFIKDPQAEVTKNLSFLEGLHLDIKGRVYLNEQGINAQFSGPSKDALLYVNWLREDNRFSETLVQISPSENGHAFPKLKLRYKPSLVQFEGGISHLPLLDSSMRAITLAPSEWRNILQPTMKNDPSKEFLNRNYILLDVRNGYEWDIGHFHGAQRPNVDCFRSTSFGLSQEEIAASDPLTNVDKGKANILMYCTGGIRCDVYSTILRQQGFQNLYTLKGGVSHYLNNEGPAEWVGNLFVFDSRLSLPPSVYYPQATTEAEMTQISGVNKFAKCYICSLEVSELRHRNCANLDCNLLFLCCSKCVKDLRGCCCLSCTTAPRLRPVLNGDQRYKKWHIYRDMDLQGKELKCA* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3225 445 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 80 442 - -
Dod04g3225 445 PANTHER THIOSULFATE SULFURTRANSFERASE/RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 2 80 442 IPR020936 -
Dod04g3225 445 Pfam UPF0176 acylphosphatase like domain 88 179 IPR040503 -
Dod04g3225 445 Gene3D - 75 182 - -
Dod04g3225 445 ProSiteProfiles Rhodanese domain profile. 225 328 IPR001763 -
Dod04g3225 445 Pfam Rhodanase C-terminal 330 411 IPR022111 -
Dod04g3225 445 Pfam Rhodanese-like domain 226 320 IPR001763 -
Dod04g3225 445 Gene3D - 195 357 IPR036873 -
Dod04g3225 445 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 225 341 IPR036873 -
Dod04g3225 445 SMART rhod_4 215 325 IPR001763 -
Dod04g3225 445 CDD RHOD_YceA 200 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3225 Dod-Chr4 56069611 56108034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3225 64 442 Sulfurtransferasese or Rhodanese AT1G17850 63.077 1.62e-179 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3225 - - gmx:100814358 659.448