Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3223 ATGGCTCACACTGACTCAGTTGATGTGATTCTGGACTTTCTCCAGAGGAATCGATTCACAAGAGCAGAGGCAGCATTGCGTAGTGAGATCAATAATCGTCCCGACTTAAATGGCTTCCTACAGAAGCTTACATTGGAAGAAAGCGCCTCTTGTGATATCTCACAAAAAGATAAGGGGAAGCCGGTGGAGATTCAAGGGGTCGATTATCATGATAGTGTTGAGGTTTCTAAAGAACTGATTGTGAAGGAAATAAAGTGTGGGGCCGGTAGAAATGCCACCGAAAGCAATTGGAAAACTGCAACACCATCTATTGGGGAACGATATAAATCGAATGAAGTGGTTGGGACAACTGAAAAAAACTTCACTTTCTCTAAAAGTTCAGAGGACAGTATACCTGATTTATACTCATGGAAGTTCAACCCCAGCAACGGTTCTGTGGAGCCCTACCAAAATGATGGTTGCAGTAGGGCTAATAATACTTTGAAGGCCTCTTTATCTCAACAATCAAAATATCAACAATCAAAATATCAAACTAATGGAGCTGTTGATTCTATTGCTGCCCGCACCAATGCAAAGTATGGAGAGGAAAATGCCATGCTTCCTGATAAAAATTCCTGGTGGCTTGGAAGTAGTAGTGAAACCCTTGTAGAGCCAAAATATGACTTTGTGCAAAGCAAAGAACCTTGGGAACATGATCAGCAGCTTAAATTTAACAGCTTTCTTAAAGTGAATTCTGCTGATAGCCCCTGGTCAAGAACTGAGGAGAATGCAAATTTGTCTTCACACTTACAGAAACATTGGTCTATCAAGACTGTTTTCCCGTTCTCCAAGGGGGATATGTCTGCAAGCTTCAATGGTGCAACTTTTCCTGGCAAAAATGGGGAAAATAGAAGGGTAGAAATTAGTGATATTAGGGCAGCTATAAAAGAGCAGGTGGATGAATCGCGGAAAGCTATTTACATGGGAAACTCACAAGGTAGTTTTGAAAAGAAGAACATTGGCAACTTAAGTTTTCCCCTTGCACCCAAAAATCAGAATGAGGAGTTTCCTAGGCTTCCTCCTGTTAAGCTCAAGTCAGAAGATAGGCCCTTTGCTGTTAATTGGGAGGAGAAGTTTGAACGAGATGGACCAACATCAAAAATCACTTGTGCTGATAACACTTTACTTATCGGTTCATATTTGGATGTTCCTATTGGACAAGAAATTAACCCTTCAGGTATGAGAAGGGCTGCAGGGGACAGTTGGTTATCTGTAAGTCAAGGGATAGCAGAGGATACATCTGATCTTGTATCGGGTTTTGCAACAGTTGGTGATGGGTTGAGTGAATCTGTTGACTATCCAAATGAATATTGGGATTCTGATGAATATGATGATGATGATGATGTTGGGTACATGAGACAACCTATTGAGGATGAAGCCTGGTTTTTGGCACATGAAATTGATTACCCTAGTGACAATGAAAAGGGGACTGGGCATGGAAGTGTTCCAGACCCTCAGGAAAGAGGTCCAGTCAAAGATGAGGATGATGACCAATCCTTTGCCGAGGAGGATTCTTACTTCTCTGGAGAGCGATATCTTCAGGCTAATAATGTTGCATCAGTTACAGCTTCAGATGATCCTATCGGTCTAATGGTTTCTAAAATATATGGAAGGACTAATGATAATGATTTGATGGCTCAATATGATGGACAGTTAATGGATGAAGAAGAATTGAACCTGATGCGTGCAGAGCCTGTCTGGCAGGGCTTTGTTACTCAGGCAAATGAACTCATCATGCTAGGTGATGGGAAGGTTTTGAAAGATAGTGGAAGATCACGACTACAGGATGTCTATATGGAGGATGATCATCATGGTTCAGTTAGGTCTATTGGGGTTGGGATCAACAGCGATGCTGCAGATATTGGTAGTGAAGTGCGGGAAAGTTGGGTTGGTGGTAGTAGTGAAGGAGATTTAGAATATTTCGGTGACTGTGATGTTGGGCCTGGTGGCTTCAGACACCCTCATCATGATTTGGATAAGAATTATATTAACAAATCAAACAAAAATGAGAAGAAAAGTGACAAGAGTGAGTCAGGTAAATACGTCATTAAGGGTGATAAGGATGCACAGTTGCAGATGAAAACTCATAGTGATGGGAACTTCTCATTCTGCCTATCTTCAAAAGATGGCCAGATGGTGCAGGCTGCCTCCAATAAGTCCCTGTGCTCTAATAACTGCAATACAGATGAAACTGCTGGCTTTCTCAATGCATTTGTGGGATCTGATGACATGCTTGCCACTTGGAGGCAGAAGAGCAGTGATTCTTCCCCTGTTAAAGGTTCTAAGGATGAGAATAATGCTAATGCAGCAAGATCTGCGAACTCCTCTCCAACAACAGTGTCAAATTATGGATATTCTGAAAGAGAGCATGTCAAGCTAGAAGAGGATGAAAACGGTGGTGTTGCAAAGGAAGATGATTTAGGGGCATCACTAGAGGACGAAGAGGCCGCTGCAGTGCAAGAGCAAGTAAGGCAAATGAAGGCACAGGAAGATGAATTTGAAACCTTCAATCTAAAGATCGTGCACAGAAAAAACAGAACTGGCTTTGAGGAGGGCAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGAAGGTATCATGTCACTGAATATCTTGGATCTGCCGCATTTAGCAAAGCTATACAAGCTCATGACCTGCACACAGGCATAGATGTCTGTGTTAAAATTATAAAGAACAACAAGGATTTTTTTGACCAAAGCCTTGATGAGATCAAGCTTTTGAAGTATGTCAACAAGCATGATCCTGCAGACAAGTATCACATTCTTCGATTGTATGATTATTTCTATTATCGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCAAACTTATATGAGTTTCATAAATTTAATAGAGAATCAGGAGGTGAAGTATACTTCACAATGCCCAGATTGCAGTCAATTACCATTCAGTGTTTGGAAGCACTTCAGTTTTTGCATAGCCTTGGACTAATACATTGCGACTTGAAGCCGGAGAATATTTTGGTTAAAAGCTATAGTAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAGACAGATCACCTTTGCTCTTATGTTCAATCAAGGTCCTATCGTGCTCCTGAGGTTATTTTGGGACTACCATACAACAAGAAGATAGATATCTGGTCACTTGGCTGCATCTTGGCCGAACTTTGTACTGGCAATGTCCTGTTCCAAAATGATTCCCCTGCTACATTACTTGCTCGGGTGATTGGGATCATTGGTCCAATTGATCAAATTATGCTGGCAAAAGGACGAGATACATACAAGTACTTCACCAAAAATCATATGCTTTACGAGCGAAACCAGGAAACCAACAGGTTAGAATATCTGATTCCAAAAAAGACATCCTTGAGGCACAGATTGCCAATGGGTGACCAAGGCTTCATTGACTTTGTTGCTCATTTGCTTGAGATCAATCCAAAGAAGCGGCCTTCTGCAGATGAGGCCCTGAAGCATCCATGGTTATCATACCCTTATGAACCCATATCATCTTGA 3576 0.4122 MAHTDSVDVILDFLQRNRFTRAEAALRSEINNRPDLNGFLQKLTLEESASCDISQKDKGKPVEIQGVDYHDSVEVSKELIVKEIKCGAGRNATESNWKTATPSIGERYKSNEVVGTTEKNFTFSKSSEDSIPDLYSWKFNPSNGSVEPYQNDGCSRANNTLKASLSQQSKYQQSKYQTNGAVDSIAARTNAKYGEENAMLPDKNSWWLGSSSETLVEPKYDFVQSKEPWEHDQQLKFNSFLKVNSADSPWSRTEENANLSSHLQKHWSIKTVFPFSKGDMSASFNGATFPGKNGENRRVEISDIRAAIKEQVDESRKAIYMGNSQGSFEKKNIGNLSFPLAPKNQNEEFPRLPPVKLKSEDRPFAVNWEEKFERDGPTSKITCADNTLLIGSYLDVPIGQEINPSGMRRAAGDSWLSVSQGIAEDTSDLVSGFATVGDGLSESVDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPVKDEDDDQSFAEEDSYFSGERYLQANNVASVTASDDPIGLMVSKIYGRTNDNDLMAQYDGQLMDEEELNLMRAEPVWQGFVTQANELIMLGDGKVLKDSGRSRLQDVYMEDDHHGSVRSIGVGINSDAADIGSEVRESWVGGSSEGDLEYFGDCDVGPGGFRHPHHDLDKNYINKSNKNEKKSDKSESGKYVIKGDKDAQLQMKTHSDGNFSFCLSSKDGQMVQAASNKSLCSNNCNTDETAGFLNAFVGSDDMLATWRQKSSDSSPVKGSKDENNANAARSANSSPTTVSNYGYSEREHVKLEEDENGGVAKEDDLGASLEDEEAAAVQEQVRQMKAQEDEFETFNLKIVHRKNRTGFEEGKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGIDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYNKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQIMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSADEALKHPWLSYPYEPISS* 1192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3223 1191 MobiDBLite consensus disorder prediction 482 515 - -
Dod04g3223 1191 MobiDBLite consensus disorder prediction 665 693 - -
Dod04g3223 1191 ProSiteProfiles Protein kinase domain profile. 880 1182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g3223 1191 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1006 1018 IPR008271 GO:0004672|GO:0006468
Dod04g3223 1191 Pfam Protein kinase domain 880 1182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g3223 1191 MobiDBLite consensus disorder prediction 762 796 - -
Dod04g3223 1191 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1189 - -
Dod04g3223 1191 Coils Coil 822 842 - -
Dod04g3223 1191 CDD PKc_DYRK_like 880 1182 - -
Dod04g3223 1191 SUPERFAMILY Protein kinase-like (PK-like) 869 1184 IPR011009 -
Dod04g3223 1191 PANTHER - 2 1189 - -
Dod04g3223 1191 Gene3D Phosphorylase Kinase; domain 1 874 961 - -
Dod04g3223 1191 SMART serkin_6 880 1182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g3223 1191 Gene3D Transferase(Phosphotransferase) domain 1 934 1182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3223 Dod-Chr4 56038422 56045423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3223 879 1177 MAP Kinase Gene Family AT5G19010 31.250 1.09e-29 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Dod04g3223 Pkinase 2.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3223 - - lang:109331412 1837.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3223 04 56038422 56045423 Dod02g2672 02 58685859 58695566 PCT