Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3210 ATGCATGGCGGTGAGGGTGAGGGAGGGAGGAGTCGGGGAGGTGTCGGAGATAGAGATGATGATTCGGAGGAGAAGAAACAGAGGGGGCGGTTTAAAAGCTTGGGGCGTCGGATGGCGGTATGTTACGGTGTCGGTGACGCTGAAGCAGCTAGCTCCACCACCACACGCGGCGAAGATGTATGGCGGCGATATGTTATTCATCCTGATAACCGGTTGTACTTTGTGTGGAAGCATTTCATACTGATATGGGCGGTGTACTCGTCGTTCTTCACCCCAATGGAGTTCGGATTCTTCAGAGGCCTGCCGGAGCAAATATTCCTGCTGGACATAGCGGGGCAATTGGCGTTCCTGGTGGACATGGTGGCGCGCTTCTTCGTGGCGTACCGGGACACCAACTCGTACTGCATTGTGGACAGCCCGTCCCGGATCGCCACGCGCTACCTGAGGTCTCCCCGCTTCACCCTCGACCTCCTCAGCTGCCTCCCCTGGGACTACATCTACAAGGCCTCCGGCAGAAAGGAGGGGGTCCGCTACCTGCTCTGGATCAGGCTCTGCCGGGCCTGCAGGGTCACCGAGTTCTTCGAGAGGCTCGAGAAGGACATCCGGGTCAACTACCTCTTCACCAGGATCGTCAAGCTTCTCGTCGTCGAGCTTTACTGCACCCACACCGCTGCCTGCATCTTCTACTATCTCGCCACCACCGTGCCCCCCTCCCACGAGTCCTACACATGGATTGGCTCCCTCAAGATGGGCGACTTCGCCTACTCCGACTTCCGCCACATCGACCTCTCCAAGCGTTACATCACCTCCCTCTACTTTGCCATTGTTACCATGGTCACTGTTGGGTATGGAGATATTCATGCCGTCAATATCAGAGAGATGATATTCATCATGATTTATGTGTCCTTTGACATGATTCTCGGTGCCTATCTTCTTGGCAACATGACGGCCTTGATTGTCAGAGGATCCAAAACTGAGAGGTTCAGGGACAAGATGGCTGAAGTCATCAAGTACATGAATAAAAACAATGTCGACAAGAACTTGAGTAAGGCCGTTAAAGGTCATTTGCGCTTGCAGTATGATCGTAGCTACGCTGAAGCTGCTGCTCTCCGTGATATCCCAGCCTATATTCGCACTAAGATTTCATTAAATTTGTATGAGCAGTTCATTCAGAATGTCTATCTTTTCAAGGGATGCTCTTCAGGGTTTATCAAACAGATTGCAACCAAAGTTCACGAAGAGTTTTTCCTCCCCGGAGAATTGGTTATGGAGCAAGGAGATGTAGCAGATCAACTTTACTTTGTATGTAATGGTGAGATGGATGAGATAAGGAGTGCAGATGGTCATACAGATGAGATAATCAGATTGCAAACCTATAGTTCATTTGGCGAGATTTCTTTCCTTTGCAATATGCCTCAAAATTCCACGGTTATAGCTCATGAATTTTGCAAGGTTTTGCGACTTGATAAGCAATCCTTTAAGGACATACTAAAGATATACTTTTTAGATGGCCGTGTCACCTTAAACAATCTCCTTGAGGGAAAAGACTCCACTATGCAACGCAAGCTGTTGGAATCAGACTTCACCCTGACTATTGGAAACCAGGAAACAGAGCTGGCTATCAGGATGAACTGTGCTGCATATGAGGGTGACTTTTACCTTTTAAAACATTTGATCGCATCAGGGGCAGATCCAAATAAGACCGATTATGATGGCAGATCACCCTTGCATATCTGTGCATCAAAAGGATATGTAGATATTTCTCATTTTCTTGTTGAACAAGGAGTAGATATCAATTTCGCAGATAAATTTGGGACAACTCCCTTACTTGAAGCCATCAAGAATGGACATGAAGAAGTAGCATCTTTACTTGTTAATGCGGGGGCTACCCTCACCATTGATGATGCTGGAAATTTTCTCTGCATGAGTGCTGCAAAAAAGGAGTTGAACATTCTTAAAATGGTTCTGGCTTGTGGAGTTAATCCAAATGCGAAAAATTATGATCAGCGTACTCCTCTCCACATTGCTGCCTCTGAAGGTTGGTATACAATGGCTGAACTACTAATAGAAGCTGGAGCAAGTGTATTATGTAAGGACAGATGGGGAAACACACCGCTCGATGAAGCTCGAACGGGTGGAAATAGAAACATGATCAAAATGCTTGAAGTTGCAAAAGTTTCTCAGCTGGCTGAATTATCCAATACCAATAGTAATCAAGAAAGTGGAGCGGGACGAGCACTGGCATCAACAGATGAAATTCCCAAAAAGAGATGTACGGTATTTCCTTTCCACCCTTGGGATTGCAAAGAGAATAGAAGAGAGGGAGTTGTACTGTGGGTTCCGCCAAGCATTGAGGAGCTTATAACGGCGGCAATGAAGCATTTGAAAATATCAAACTGTTCCTGTGTTTTAACAGATAAAGGTGGCAAAATTCTTAATGTAGACATGATTAGCAACGATGAAAAGCTATTTCTGGTGAGCGAAGTGCATAAAGTGATCGCATGTTCTGGTCACCCAAGTGATCAGCCACAGCAGCAGGGACAAATCAAATCAGTAACCACCGGCTGGTTCTAG 2574 0.4678 MHGGEGEGGRSRGGVGDRDDDSEEKKQRGRFKSLGRRMAVCYGVGDAEAASSTTTRGEDVWRRYVIHPDNRLYFVWKHFILIWAVYSSFFTPMEFGFFRGLPEQIFLLDIAGQLAFLVDMVARFFVAYRDTNSYCIVDSPSRIATRYLRSPRFTLDLLSCLPWDYIYKASGRKEGVRYLLWIRLCRACRVTEFFERLEKDIRVNYLFTRIVKLLVVELYCTHTAACIFYYLATTVPPSHESYTWIGSLKMGDFAYSDFRHIDLSKRYITSLYFAIVTMVTVGYGDIHAVNIREMIFIMIYVSFDMILGAYLLGNMTALIVRGSKTERFRDKMAEVIKYMNKNNVDKNLSKAVKGHLRLQYDRSYAEAAALRDIPAYIRTKISLNLYEQFIQNVYLFKGCSSGFIKQIATKVHEEFFLPGELVMEQGDVADQLYFVCNGEMDEIRSADGHTDEIIRLQTYSSFGEISFLCNMPQNSTVIAHEFCKVLRLDKQSFKDILKIYFLDGRVTLNNLLEGKDSTMQRKLLESDFTLTIGNQETELAIRMNCAAYEGDFYLLKHLIASGADPNKTDYDGRSPLHICASKGYVDISHFLVEQGVDINFADKFGTTPLLEAIKNGHEEVASLLVNAGATLTIDDAGNFLCMSAAKKELNILKMVLACGVNPNAKNYDQRTPLHIAASEGWYTMAELLIEAGASVLCKDRWGNTPLDEARTGGNRNMIKMLEVAKVSQLAELSNTNSNQESGAGRALASTDEIPKKRCTVFPFHPWDCKENRREGVVLWVPPSIEELITAAMKHLKISNCSCVLTDKGGKILNVDMISNDEKLFLVSEVHKVIACSGHPSDQPQQQGQIKSVTTGWF* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3210 857 Gene3D - 74 320 - -
Dod04g3210 857 SUPERFAMILY Ankyrin repeat 543 721 IPR036770 -
Dod04g3210 857 ProSiteProfiles Ankyrin repeat region circular profile. 668 695 - -
Dod04g3210 857 Gene3D - 636 734 IPR036770 -
Dod04g3210 857 Gene3D - 536 635 IPR036770 -
Dod04g3210 857 PRINTS EAG/ELK/ERG potassium channel family signature 267 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod04g3210 857 PRINTS EAG/ELK/ERG potassium channel family signature 311 320 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod04g3210 857 PRINTS EAG/ELK/ERG potassium channel family signature 109 119 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod04g3210 857 PRINTS EAG/ELK/ERG potassium channel family signature 219 229 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dod04g3210 857 Pfam KHA, dimerisation domain of potassium ion channel 756 825 IPR021789 -
Dod04g3210 857 Pfam Ankyrin repeats (many copies) 656 709 IPR002110 GO:0005515
Dod04g3210 857 PANTHER POTASSIUM CHANNEL AKT1 60 829 IPR045319 GO:0005249|GO:0006813
Dod04g3210 857 Pfam Cyclic nucleotide-binding domain 415 498 IPR000595 -
Dod04g3210 857 ProSiteProfiles Ankyrin repeat profile. 604 636 IPR002110 GO:0005515
Dod04g3210 857 ProSiteProfiles Ankyrin repeat profile. 571 603 IPR002110 GO:0005515
Dod04g3210 857 ProSiteProfiles KHA domain profile. 757 843 IPR021789 -
Dod04g3210 857 MobiDBLite consensus disorder prediction 837 857 - -
Dod04g3210 857 ProSiteProfiles Ankyrin repeat profile. 668 700 IPR002110 GO:0005515
Dod04g3210 857 SMART ANK_2a 571 600 IPR002110 GO:0005515
Dod04g3210 857 SMART ANK_2a 701 730 IPR002110 GO:0005515
Dod04g3210 857 SMART ANK_2a 538 567 IPR002110 GO:0005515
Dod04g3210 857 SMART ANK_2a 635 664 IPR002110 GO:0005515
Dod04g3210 857 SMART ANK_2a 604 633 IPR002110 GO:0005515
Dod04g3210 857 SMART ANK_2a 668 697 IPR002110 GO:0005515
Dod04g3210 857 MobiDBLite consensus disorder prediction 838 857 - -
Dod04g3210 857 ProSiteProfiles Ankyrin repeat region circular profile. 571 603 - -
Dod04g3210 857 Pfam Ankyrin repeats (3 copies) 545 634 IPR002110 GO:0005515
Dod04g3210 857 SUPERFAMILY Voltage-gated potassium channels 67 320 - -
Dod04g3210 857 SMART cnmp_10 395 512 IPR000595 -
Dod04g3210 857 PANTHER POTASSIUM CHANNEL SKOR-LIKE 60 829 - -
Dod04g3210 857 SUPERFAMILY cAMP-binding domain-like 323 511 IPR018490 -
Dod04g3210 857 Pfam Ion transport protein 74 320 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dod04g3210 857 ProSiteProfiles Ankyrin repeat region circular profile. 604 635 - -
Dod04g3210 857 Gene3D Jelly Rolls 382 507 IPR014710 -
Dod04g3210 857 Gene3D Helix hairpin bin 323 381 - -
Dod04g3210 857 ProSiteProfiles cAMP/cGMP binding motif profile. 395 497 IPR000595 -
Dod04g3210 857 MobiDBLite consensus disorder prediction 1 29 - -
Dod04g3210 857 CDD CAP_ED 395 500 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3210 Dod-Chr4 55721770 55729345 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3210 643 721 Ion Channels AT5G37500 29.703 5.53e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3210 K21867 - gmx:100798698 1120.92