Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3209 ATGGCAGTTGTGCGCGAGCGCCGCGGCCTCAACCTCCGCCTTCCCCTACCGGAGCCCTCGGAGCGCCGCCCCCGTTTCCCTCTTCCGCTCCCTCCCGCCTCCGCCTCCAAGGGCTCGACCGGCGACGCCATCGCCCCCCAGGACATCGAGAAGTTGCAGGTGCTGGGCCACGGCAACGGCGGGACCGTGTACAAAGTGCGGCACAAGCGCACCTCCGCCATCTACGCGCTGAAGGTGGTGCACGGGGACTCGGACCCGGTGACACGGCGGCAGGTGCGACGAGAAATGGATATCCTGCGGCGGACGGACTCCCCCCACGTGGTGCGTTACGAGGGGTTCTTCGAGAAGCCGTCCGGGGACGTGGCGATCCTGATGGAGTACATGGAGCTGGGCAGCCTGGAGAGCGTGGTCAAAGGCAGCGGCACCTTCTCGGAGGGGCAGCTGGCAGCGGTGGCGCGCCAGGTGCTGAGCGGCCTCGCCTACCTTCACTCCCACAAGATCATTCACCGCGACATCAAGCCCTCCAACCTCCTCGTCAGCCGCAGCATGGACGTCAAGATCGGCGACTTCGGCGTCAGCAAGGTCATGTGCCGCACCCTCGATGCCTGCAACTCCTACGTGGGAACCTGCGCCTACATGAGCCCCGAGCGCTTCGACCCGGACTCCTACGGCGGCAACTACGACGGGTACGCCGCTGACATATGGAGCCTGGGCCTCACCCTCTTTGAGCTGTATGTGGGCCACTTCCCCTTCCTGGCATCGGGCCAGAGGCCCGACTGGGCCACCCTGATGTGCGCCATATGTTTCGGAGAGCCGCCCAGGTTGCCGCACAGTGCCTCCCACCACTTTCGGAGCTTCATTGAGTGCTGCCTCAAGAAGGACTCCTCCCTGCGCTGGACTGCCCCTCAACTCCTCACCCACCCCTTCCTCGCTAGCTAG 939 0.6571 MAVVRERRGLNLRLPLPEPSERRPRFPLPLPPASASKGSTGDAIAPQDIEKLQVLGHGNGGTVYKVRHKRTSAIYALKVVHGDSDPVTRRQVRREMDILRRTDSPHVVRYEGFFEKPSGDVAILMEYMELGSLESVVKGSGTFSEGQLAAVARQVLSGLAYLHSHKIIHRDIKPSNLLVSRSMDVKIGDFGVSKVMCRTLDACNSYVGTCAYMSPERFDPDSYGGNYDGYAADIWSLGLTLFELYVGHFPFLASGQRPDWATLMCAICFGEPPRLPHSASHHFRSFIECCLKKDSSLRWTAPQLLTHPFLAS* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3209 312 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
Dod04g3209 312 Gene3D Phosphorylase Kinase; domain 1 40 123 - -
Dod04g3209 312 Gene3D Transferase(Phosphotransferase) domain 1 124 312 - -
Dod04g3209 312 CDD PKc_MAPKK_plant_like 48 310 - -
Dod04g3209 312 ProSiteProfiles Protein kinase domain profile. 49 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g3209 312 Pfam Protein kinase domain 50 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g3209 312 PANTHER SERINE/THREONINE-PROTEIN KINASE C01C4.3-RELATED 2 311 - -
Dod04g3209 312 SMART serkin_6 49 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g3209 312 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Dod04g3209 312 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 2 311 - -
Dod04g3209 312 SUPERFAMILY Protein kinase-like (PK-like) 47 311 IPR011009 -
Dod04g3209 312 MobiDBLite consensus disorder prediction 14 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3209 Dod-Chr4 55711854 55713090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3209 1 310 MAP Kinase Kinase Gene Family AT1G73500 64.309 1.28e-138 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Dod04g3209 Pkinase 4.5e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3209 K20604 - qsu:112004321 464.536