Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3208 ATGGATTCTGAGAGGAACAGTAACGGTAACGGAGGAGAAGAAGAGGAGGAGTTAGAGTTCGAGGTAGAAGACCAGGAACAGGAAGATAATAATGGTGGAAAGGATGAGATCCTCAAGACAAGGATCTCTGCGCATCCCCTCTATCAACTGCTGCTTGAAGCTCACCTGGGGTGCTTGAAGGTTGGTGCCGACATTTCCAACTTGGGCAGAGAGCAGAAGATCATTTTACAGATGGAAGCAATGAAGAAACAAAACCTGGGCAAGTTCAGTCAGTCGGAGCTTGATCTCTTCATGGAAGCATATTGCTTGGCACTAGGCAAGCTTAAAGAAGCAATGGAGAAACCACAACTGAAGTCCATGGCTTACATCAACAACATGCATTCACAGCTTGGGGAGCTCACTAAGACGACCATATGTGCATCTGCCGAACCTGCTGCAACAGCATCTGAATCTGCATCTTCTAGTGAGTGCAAATTCGGAGAGACCCTGCAATTTAATTAA 501 0.4631 MDSERNSNGNGGEEEEELEFEVEDQEQEDNNGGKDEILKTRISAHPLYQLLLEAHLGCLKVGADISNLGREQKIILQMEAMKKQNLGKFSQSELDLFMEAYCLALGKLKEAMEKPQLKSMAYINNMHSQLGELTKTTICASAEPAATASESASSSECKFGETLQFN* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3208 166 Pfam KNOX1 domain 38 63 IPR005540 GO:0003677|GO:0005634
Dod04g3208 166 PANTHER FUSED COMPOUND LEAF 1 22 138 - -
Dod04g3208 166 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 22 138 - -
Dod04g3208 166 SMART KNOX1_2 36 80 IPR005540 GO:0003677|GO:0005634
Dod04g3208 166 MobiDBLite consensus disorder prediction 1 33 - -
Dod04g3208 166 MobiDBLite consensus disorder prediction 13 30 - -
Dod04g3208 166 SMART KNOX2_2 84 135 IPR005541 GO:0003677|GO:0005634
Dod04g3208 166 Pfam KNOX2 domain 92 134 IPR005541 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3208 Dod-Chr4 55704315 55705761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3208 36 156 Homeobox Transcription Factor Family AT4G08150 35.200 2.01e-15 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3208 - - gmx:100805160 164.466