Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3203 ATGCGGCCTCAGAGGCAGAGGGAGAGGGTCACCCTTGGCATTGTGGCCACCGTGTTGATGTTGCTGCTTCCATCTCCATCTACATGGGCGGAGGCGGCAGATCTGGCGTCGGAGCGAGCCGCATTGCTGGCTCTGCGGTCCTCAGTGGGGGGCCGGACACTCTTCTGGAACGCCACCAACCAGAGCCCCTGCAACTGGGCCGGCGTCCAGTGCGACCAAGGCCAGGTCGTCGAGCTCCACCTCCCCGCCGTCGCCCTCTCCGGCCGCATCCCCGCCGGAATATTCGGGAACTTGACCCACCTCCGCACCCTCAGCCTCCGCTTCAACGCCCTCACGGGGCCTCTCCCCCCAGATCTCGCCTCCTGCGTCAACCTCCGCAACCTCTACCTGCAGCGCAACCTCTTCTCCGGCGAAATCCCCCAGTTCCTGTTCCGCCTCCCCGACCTGGTTCGCCTAAACATGGGCTTCAACAACTTCTCCGGCGCAGTGTATGCGGGCTTCAACAACCTGACCAGACTCCGCACTCTGTTCCTCGAAAACAACCAGCTCTCCGGCCCCATCCCGGAGCTGAGCCTCCCCGACCTCGAGCAGTTCAACGTCTCCTACAACTTGCTCAATGGCTCTGTCCCCACCAATTTGCAGACTTTCCCCAAAGACTCCTTCCTGGGCAATTCGCTCTGTGGCCAGCCCCTTGCCCTCTGCCCTGGAAATGGAACCGCACCCTCTACCGCCGGCGACATTGCAGGAACCGATGGGGCCGGAAAGAAGAAGAAGAAGCTGTCCGGGGGTACCATTGCCGGAATCGTTATCGGATCCGTGGTGTGTCTTCTATTGGTTGCGTTTGCACTGATCCTTTTGTGCAGGAACAAGAGTGCTAAGAAGACCAGTGCCGTTGACGTTGCCACTGCGAAGCATCCCGAGGCGGAACTTCCCGGTGACAAACCAGTCGGCGATGTGGAGAATGGGGCTCACAGTAATGGCGCTCACGATAATGGCTACACGGTGGCTGTTGCAGCGGCAGCGGCTATGGCGGCAGGGAACGGAAACAAGGCTGAGGCCAATGGTGGTGGTGGTGGTGCTGCTGCTGCTGGAGCCAAAAAGCTGGTGTTTTTTGGTAATTCGGCGACGGCCGCGGCGAAGCCATTTGATCTGGAGGATTTGCTTAGAGCTTCGGCGGAGGTTTTGGGGAAAGGGACTTTTGGGACGGCGTACAAGGCGGTGTTGGAGGCTGGGCCTGTGGTGGCTGTGAAGAGGTTGAAGGATGTGAGCATCTCTGAGAAGGAGTTCAAGGACAAGATTGAGGCTGTGGGAGCAATGGATCATCAGAATTTGGTCCTTCTCAGGGCTTACTATTTCAGCAGGGATGAGAAGCTGCTTGTTTATGACTACATGCCTATGGGGAGCTTATCTGCACTTTTGCATGGAAACAAAGGGGCAGGTAGGACGCCATTGAATTGGGAAATCAGATCGGGCATTGCACTTGGAGCTGCTCGTGGCATTGAGTACCTACATTCACAGGGTCCCAATGTTTCTCATGGAAATATAAAGTCATCCAATATCCTGTTAACCAAGTCCTATGATGCCAGAGTATCTGACTTCGGCCTTGCACACCTGGTTGGCCCCTCCTCTACCCCAAACCGAGTTGCTGGCTACCGCGCGCCTGAGGTCACTGATCCTCGCAAAGTATCTCAGAAGGCAGACGTGTACAGCTTTGGTGTATTGCTGCTGGAACTTCTGACTGGGAAGGCACCCACCCATGCTCTCCTAAACGAGGAAGGAGTAGACCTCCCCAGATGGGTGCAATCTGTTGTTAGAGAAGAGTGGACTTCTGAGGTCTTTGATCTTGAGCTCCTTAGGTATCAGAATGTCGAAGAGGAGATGGTTCAGTTGTTGCAACTTGCAGTTGATTGTGCAGCACCATACCCAGATAAGCGCCCTTCAATGTCTGAAGTGGCACAGAGCATTGAGGAGTTACGTCGGTCTAGCTTGAAAGAGGATCAAGACCAGATCCAACAACATGATCTGATCAATGATGTAGAACTATAG 2046 0.5582 MRPQRQRERVTLGIVATVLMLLLPSPSTWAEAADLASERAALLALRSSVGGRTLFWNATNQSPCNWAGVQCDQGQVVELHLPAVALSGRIPAGIFGNLTHLRTLSLRFNALTGPLPPDLASCVNLRNLYLQRNLFSGEIPQFLFRLPDLVRLNMGFNNFSGAVYAGFNNLTRLRTLFLENNQLSGPIPELSLPDLEQFNVSYNLLNGSVPTNLQTFPKDSFLGNSLCGQPLALCPGNGTAPSTAGDIAGTDGAGKKKKKLSGGTIAGIVIGSVVCLLLVAFALILLCRNKSAKKTSAVDVATAKHPEAELPGDKPVGDVENGAHSNGAHDNGYTVAVAAAAAMAAGNGNKAEANGGGGGAAAAGAKKLVFFGNSATAAAKPFDLEDLLRASAEVLGKGTFGTAYKAVLEAGPVVAVKRLKDVSISEKEFKDKIEAVGAMDHQNLVLLRAYYFSRDEKLLVYDYMPMGSLSALLHGNKGAGRTPLNWEIRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAPYPDKRPSMSEVAQSIEELRRSSLKEDQDQIQQHDLINDVEL* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3203 681 Gene3D Ribonuclease Inhibitor 191 237 IPR032675 -
Dod04g3203 681 Gene3D Transferase(Phosphotransferase) domain 1 464 680 - -
Dod04g3203 681 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 680 - -
Dod04g3203 681 SUPERFAMILY Protein kinase-like (PK-like) 393 655 IPR011009 -
Dod04g3203 681 ProSiteProfiles Protein kinase domain profile. 389 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g3203 681 Pfam Leucine rich repeat N-terminal domain 36 72 IPR013210 -
Dod04g3203 681 Gene3D Ribonuclease Inhibitor 35 190 IPR032675 -
Dod04g3203 681 PANTHER OS05G0588300 PROTEIN 15 680 - -
Dod04g3203 681 Gene3D Phosphorylase Kinase; domain 1 368 463 - -
Dod04g3203 681 SUPERFAMILY L domain-like 54 216 - -
Dod04g3203 681 CDD STKc_IRAK 395 658 - -
Dod04g3203 681 Pfam Protein kinase domain 392 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g3203 681 ProSitePatterns Protein kinases ATP-binding region signature. 395 417 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3203 Dod-Chr4 55664814 55668509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3203 34 674 Receptor kinase-like Gene Family AT1G48480 63.902 0.0 800
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dod04g3203 Pkinase 5.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3203 - - gmx:100818955 964.911
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3203 04 55664814 55668509 Dod02g3749 02 76523138 76526236 PCT