Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3201 ATGGCGAACTGGTCGGAGACGAGAGCCACAAATAAAAGCTTAGAGAGCCTAATGGACAAAGACAAACGAGGAGGAGCCGCAAGAAATGCGCAGCAGCAGCAGCAGCAGCAACTGAGTCGTATGAGGCCCCAGAAGTCGGTTCCCGGCACTGGCCTAGAATTCAGTAACATCTCGTATAGTGTCATAAAGAAGCAGAAGAAGGATGGAATTTGGATCAAGAAAGAAGCATATCTTCTTCATGACATCTCTGGCCAGGCAATAAAGGGTGAAATCATGGCAATCATGGGCCCTAGTGGTGCTGGCAAATCCACCTTTCTTGATGCCTTGGCCGGGAGAATTGCAAAAGGGAGTCTAGAAGGGTCTGTTAGAATTGATGGAAAGCCAGTAACTACAAGCTGCATGAAAATGGTGTCATCATATGTGATGCAAGATGACCAGCTCTTCCCTATGTTGACAGTTTTTGAAACATTTATGTTCGCAGCTGAAGTTAGACTTCCTCCTTCCATTTCCATGGAGGAAAAGAAGAGGAGGGTTTATGAGCTCCTTGATCAACTGGGCTTACAGAGTGCTACACAAACCTATATTGGTGATGAGGGGAGGCGAGGAGTGTCAGGAGGGGAACGACGAAGGGTTTCTATTGGCATAGACATCATTCATAAGCCATCACTTCTGTTTCTGGACGAACCTACCTCAGGCCTTGATTCAACGAGCGCTTACAGTGTAATGGAAAAGGTTAAAGACATAGCTCTTGGTGGCAGCATCGTCCTTATGACCATACACCAGCCTTCGTATAGAATTCAATTGCTCCTCGACAAGATCGCCGTTGTTGCAAGGGGAAGACTGATATACATGGGAAGGCCAGATGCACTTCAGGATCACCTTTCCAGATTTGGAAGGCCTGTACCTGATGGAGAAAACAGTGTTGAGTATCTCCTAGATGTTATCAATGAATATGATCAAGCAACGGTTGGGCTTGAACCCCTTGTCCAATTCCAACGTCATGGCCTCAAACCTGACCAAGCAGCCATGACACCTGTTCGGAAAACTCCAAGGACACCTCATAGAAGGAACACTCCTGCTCCTGCATCTAAACACATGATCAGCCTACACAGCCAAGGATTTGCTGCTGGAACACCACAACCTGATTCTACGCAGCTTGGTTATGACGATGAGGAAGATGATGATGACAGCTTTGATAAATCCCTCGAAAGGAAAAGTGCTCAGACACCAAGGAATATGAGCAGTGGTGTTTACCCACATTTGGCTTCTCAGTTCTACAAAGAATTCTCAGCCAGAGATTTCTCAGTCTGGCTTTACCATGGTGTAGTAGGAACCCCCCGTCGCCAACCATCATGGACACCTGCAAAAACGCCCATGTCAGGATCAACAAGTGCCATTAGCAGCCAATATTCTGCATATTATCGCCGCAAAACTCCTGCAGTGGTTAGCCAGTCGATGGACTGCTCAGCATCTTCATATGCAATTTCATATGAAGAATCTGAGATTGAGGAGGAAGTGCTTGATGAGCCAAACCTTGGTTCCAAGTATGCAAACCCATGGCTGCGTGAGGTTGCTGTGCTCTCATGGCGAACAGCACTGAATGTGATTCGCACCCCGGAACTCTTCCTCTCCCGTGAGATTGTGCTAACAGTCATGGCACTTATCCTGTCCTCCGTTTTCAGAAATCTGGGTCATCCCACTTTTAAAGACATCAATAGGCTCCTCAATTTCTATATCTTTGCAGTGTGCCTTGTTTTCTTTTCTTCCAATGATGCAGTCCCATCTTTTATCTTGGAAAGGTTCATCTTCATCAGGGAGACTTCCCACAATGCTTATCGAGCCTCTTCATATGTCATTTCTTCCCTCATTGTTTACCTTCCATTTTTTGCTGCACAAGGCCTCACGTTTTCTGCCATAACCAAAGTACTACTCCACTTGAAAAGCAGTCTCTTGAATTTCTGGCTAATACTTTTTGCCTCACTTATCACTACCAATGCATATGTGATGCTTGTTAGTGCACTTGTGCCAAGTTACATCACAGGGTATGCAGTTGTCATAGCCACAACAGCGCTCTTCTTTTTGACCTGTGGTTTCTTCCTCAAGCGAACTCAGATACCCCTTTACTGGAGGTGGCTACACTATATTTCTGCAATCAAATACCCTTTTGAGGCATTGCTCACAAATGAATTCAAGAATCGCGGCTGCTACACAGGAAACAAAGCAGAATTGTCCCCTGGCCCATTAGGAGAGGTGATGATCAGCAACCACCATAACACAAGCATTCTGCCCACTGAATGCTTAATAGGAGAAGATATCTTATCCACAATGGATATCGAAATGGAGAACATATGGTATGACATCTTGATCCTCTTAGCTTGGGGTGTTCTTTACAGGTTCTTCTTCTATTTGGTTTTGAGATTTTACTCCAAGAATGAGAGGAAATGA 2445 0.4532 MANWSETRATNKSLESLMDKDKRGGAARNAQQQQQQQLSRMRPQKSVPGTGLEFSNISYSVIKKQKKDGIWIKKEAYLLHDISGQAIKGEIMAIMGPSGAGKSTFLDALAGRIAKGSLEGSVRIDGKPVTTSCMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISMEEKKRRVYELLDQLGLQSATQTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVMEKVKDIALGGSIVLMTIHQPSYRIQLLLDKIAVVARGRLIYMGRPDALQDHLSRFGRPVPDGENSVEYLLDVINEYDQATVGLEPLVQFQRHGLKPDQAAMTPVRKTPRTPHRRNTPAPASKHMISLHSQGFAAGTPQPDSTQLGYDDEEDDDDSFDKSLERKSAQTPRNMSSGVYPHLASQFYKEFSARDFSVWLYHGVVGTPRRQPSWTPAKTPMSGSTSAISSQYSAYYRRKTPAVVSQSMDCSASSYAISYEESEIEEEVLDEPNLGSKYANPWLREVAVLSWRTALNVIRTPELFLSREIVLTVMALILSSVFRNLGHPTFKDINRLLNFYIFAVCLVFFSSNDAVPSFILERFIFIRETSHNAYRASSYVISSLIVYLPFFAAQGLTFSAITKVLLHLKSSLLNFWLILFASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPLYWRWLHYISAIKYPFEALLTNEFKNRGCYTGNKAELSPGPLGEVMISNHHNTSILPTECLIGEDILSTMDIEMENIWYDILILLAWGVLYRFFFYLVLRFYSKNERK* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3201 814 MobiDBLite consensus disorder prediction 27 50 - -
Dod04g3201 814 Pfam ABC-2 type transporter 524 730 IPR013525 GO:0016020|GO:0140359
Dod04g3201 814 SMART AAA_5 88 288 IPR003593 -
Dod04g3201 814 PANTHER ABC TRANSPORTER 6 808 - -
Dod04g3201 814 MobiDBLite consensus disorder prediction 1 50 - -
Dod04g3201 814 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 296 IPR027417 -
Dod04g3201 814 MobiDBLite consensus disorder prediction 336 414 - -
Dod04g3201 814 ProSitePatterns ABC transporters family signature. 203 217 IPR017871 GO:0005524
Dod04g3201 814 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 52 303 IPR003439 GO:0005524
Dod04g3201 814 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 6 808 - -
Dod04g3201 814 Pfam ABC transporter 79 231 IPR003439 GO:0005524
Dod04g3201 814 Gene3D - 51 297 IPR027417 -
Dod04g3201 814 CDD ABCG_EPDR 52 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3201 Dod-Chr4 55650963 55654214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3201 78 304 Calmodulin-binding Proteins AT2G36910 28.326 6.01e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3201 K05681 - gmx:100819497 1269.99