Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3195 ATGTCTTCTCTATTAGATGAGTACAAGGAGCACTTGCTGGTGGATGTGGATGGCCACGCGAATGGGAATGGGAATGGCGGGGGCGCCCCCAAGTTGGAGATACGGAATCTGAGGAGAGAGTCAGAAGCAGGGGTGGCCATACTGAAGGGCGTCAGCGTGGACATCCCAAAGGGTGTGATCGTGGGAGTGATAGGCCCCAGTGGCAGCGGCAAGTCAACGCTCCTCAGGGCCTTGAACCGCCTCTGGGAGCCTCCCTCCCACTCCGTCTTCCTCGACGGCCGAGACATCTGCGATCTCGACGTTCTCTCTCTTCGCCGCAACGTTGGCATGCTCTTTCAGCTCCCTGCCCTCTTTGAAGGGACAGTTGCGGACAACGTGAGGTATGGACCACAACTGAAGGGGAAAAAGCTAACGGATGAAGAGGTGCGCAAGCTGCTGATAGTGGCGGACCTTGATGCTTCTTTCCTCGATAAGCCCGCTGCTGAGCTCTCCGTCGGTCAAGCTCAAAGGGTTGCTCTTGCCAGGACCTTAGCTAATTCCCCTGAGGTTTTGCTGCTGGATGAGCCAACCAGTGCGTTAGATCCAATATCGACAGAGAACATAGAGGATGCCCTGATGAAGCTGAACAAGAGTCGGGGCATGACGATGGTCATGGTCTCTCACAGCATCAAACAAATCCAGAGGATAGCTGACATTGTGTGCCTGCTTGTTGATGGCGAAATTGTTGAAGTTCTCAAGCCTGATCAACTCTCCGATGCCAAGCATCCCATGGCACGAAGGTTTCTTGAACTCAGTGCTTAA 801 0.5418 MSSLLDEYKEHLLVDVDGHANGNGNGGGAPKLEIRNLRRESEAGVAILKGVSVDIPKGVIVGVIGPSGSGKSTLLRALNRLWEPPSHSVFLDGRDICDLDVLSLRRNVGMLFQLPALFEGTVADNVRYGPQLKGKKLTDEEVRKLLIVADLDASFLDKPAAELSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEDALMKLNKSRGMTMVMVSHSIKQIQRIADIVCLLVDGEIVEVLKPDQLSDAKHPMARRFLELSA* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3195 266 Pfam ABC transporter 48 191 IPR003439 GO:0005524
Dod04g3195 266 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 253 IPR027417 -
Dod04g3195 266 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 28 265 IPR005670 GO:0005315|GO:0016020|GO:0035435
Dod04g3195 266 ProSitePatterns ABC transporters family signature. 163 177 IPR017871 GO:0005524
Dod04g3195 266 CDD ABC_PstB_phosphate_transporter 32 250 IPR005670 GO:0005315|GO:0016020|GO:0035435
Dod04g3195 266 Gene3D - 29 265 IPR027417 -
Dod04g3195 266 SMART AAA_5 57 240 IPR003593 -
Dod04g3195 266 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 28 265 - -
Dod04g3195 266 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 32 263 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3195 Dod-Chr4 55610948 55612435 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3195 32 250 Calmodulin-binding Proteins AT2G36910 32.759 3.90e-30 117