Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3190 ATGGACGACCTCCTCGGCCTCCTTAGGATTCGCGTCAAGCGTGGCGTCAACCTCGCCGTTCGTGACGTCAATACTAGCGACCCATACGTCGTCGTTAAGATGGGCAGGCAGAAACTCAAGACGCGTGTGATAAAAAAGGATGTTAATCCTGAGTGGAATGAGGACCTTACGCTTACTGTTACATATCCGATTGGTTCATTCTTACTGACTGTGTATGACCACGACACTTTTAGCAAAGACGACAAAATGGGCGATGCAGAATGTGACATCAGGCCATTTATAGAAGCCTTAAAGACGAACACAGAGGGCCTCCCAACCGGCACTATAATCAGTAGATTACAGCCATGCAGGAGAAACTGCCTAGCGGAGGAGAGCTGCATCACCTGGAACAACGGCAAAGTTGTCCAAGATATTGTCCTCAGATTGCGAAATGTCGAATGTGGTGAAGTCGAACTCCAATTGCAATGGATAGATCTTCCTGGTGCCAGGGGTTTATATGATGTGATGTGA 510 0.4784 MDDLLGLLRIRVKRGVNLAVRDVNTSDPYVVVKMGRQKLKTRVIKKDVNPEWNEDLTLTVTYPIGSFLLTVYDHDTFSKDDKMGDAECDIRPFIEALKTNTEGLPTGTIISRLQPCRRNCLAEESCITWNNGKVVQDIVLRLRNVECGEVELQLQWIDLPGARGLYDVM* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3190 169 CDD C2_ArfGAP 5 148 - -
Dod04g3190 169 Pfam C2 domain 6 92 IPR000008 -
Dod04g3190 169 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Dod04g3190 169 SMART C2_3c 7 102 IPR000008 -
Dod04g3190 169 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 1 163 - -
Dod04g3190 169 Gene3D C2 domain 4 163 IPR035892 -
Dod04g3190 169 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 159 IPR035892 -
Dod04g3190 169 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3190 Dod-Chr4 55527558 55528727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3190 38 165 C2H2 Transcription Factor Family AT1G70790 58.462 6.94e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3190 - - gmx:100799469 277.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3190 04 55527558 55528727 Dod04g3190 04 55527558 55528727 ECH