Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3182 ATGTGGATGGTAGGTTACAATGAAGGAAGTGACTTCAACATGGCTGATTATGCATTCAATGGAAGGAAACTAAGGCCTCTCATGCCAAGGCCCGTGACTTCTCCTAACCACACCTCAGCTACTACAATTCCTAATTGTTTGACCCGCATTCATGACCACGATTTCTTTTCACAATATCACAATCTGGCATCAGTGGCAGAGCAGGGCAAGAGAGAGTTCAATACTCCACCAGTTGTGGTGAGCTCAAGGTGGAATCCTACTCCAGAGCAGCTGAGAGCACTGGAGGAGTTGTATCGAAGAGGAACAAGAACACCATCTGCGGAGCAGATCCAGCATATCACCGCACAGCTTAGGAGATATGGAAAGATTGAAGGGAAGAACGTTTTCTATTGGTTTCAGAATCACAAAGCCAGAGAGAGGCAGAAAAGACGCCGTCAAATGGAATCAGCCGCTGAGGGTCAGACTCTCCCCCGTGACTTTGATGCTGCTCTCGAAAAGAAAGACTTAGGCGCAAGTAGGACAGTGTTTGAAGTTGAACAGACCAAGAACTGGGCACCCTCTACAAACTGCACTACTCTTGCAGAGGAATCTGTTTCAATACAAAGGGCAGCAAAAGCAGTGGTTGCAGAGTGTAGAACAGATGGATGGCTCCAATTCGATGGGCCGGAGTTACAACAAAGGAGAAACTTTATGGAAAGGAATGCCACGTGGCATATGATGCAGTTATCTTGTCCTCTTCCTCCTACAGTCACCCCCCACCTCATAAACACCCCTCCTAATGCCCCTACAACTAGCATGGCTACTACAACCTCAGTAACGGCAAGATTGATGGACCCTAAGCTCATTAAGGCTCACGATCTCAGCTTCGTTATTTCACCTCACCGAGAAAACGGTGTTATCCACTTAACCAGTATCAGCTCAGAGGATGATAACTGCGTGGAATCTCAAACCCTTCAACTTTTCCCGACAAGGAATGGGGATGACAGCAGTGATAACGTTAACCAACAGAAAGAGACAGAGATATCAGTTCAAGAATTGAATGCGCCCAGCCAGTTTTTTGAGTTTCTTCCATTGAAGAACTGA 1083 0.4654 MWMVGYNEGSDFNMADYAFNGRKLRPLMPRPVTSPNHTSATTIPNCLTRIHDHDFFSQYHNLASVAEQGKREFNTPPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESAAEGQTLPRDFDAALEKKDLGASRTVFEVEQTKNWAPSTNCTTLAEESVSIQRAAKAVVAECRTDGWLQFDGPELQQRRNFMERNATWHMMQLSCPLPPTVTPHLINTPPNAPTTSMATTTSVTARLMDPKLIKAHDLSFVISPHRENGVIHLTSISSEDDNCVESQTLQLFPTRNGDDSSDNVNQQKETEISVQELNAPSQFFEFLPLKN* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3182 360 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 275 360 IPR044555 GO:0003700|GO:0099402
Dod04g3182 360 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 10 257 IPR044555 GO:0003700|GO:0099402
Dod04g3182 360 CDD homeodomain 83 143 IPR001356 GO:0003677
Dod04g3182 360 ProSiteProfiles 'Homeobox' domain profile. 87 142 IPR001356 GO:0003677
Dod04g3182 360 Pfam Homeodomain 82 141 IPR001356 GO:0003677
Dod04g3182 360 SMART HOX_1 79 146 IPR001356 GO:0003677
Dod04g3182 360 PANTHER WUSCHEL, PUTATIVE-RELATED 275 360 - -
Dod04g3182 360 PANTHER WUSCHEL, PUTATIVE-RELATED 10 257 - -
Dod04g3182 360 Gene3D - 80 142 - -
Dod04g3182 360 SUPERFAMILY Homeodomain-like 82 148 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3182 Dod-Chr4 55487205 55489352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3182 1 360 Wox Gene Family AT3G18010 41.519 3.53e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dod04g3182 Homeodomain 1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3182 - - gmx:100777274 612.068