Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3175 ATGAAGAACATTCTTAAGAAGCTTCATATCATGTCTAACCAATCAGAAGATGCACAAGGGCCTAGTTCATCAAGGAGCAACAAGCCCAGCGATGGTTCATCCTCGTCGCATACCCCTAAGAAGATTTCCGGTTGGTTGCATTCAGTTTCCAATAGGCAGAGTCCAAGTCCCCCATCTCCCAACCCGGTGAGGGTGGAAAGAATGGAGACCTGTGATTCAGTGAGCAGTGGTGGTTTGGATGTTGTTTCTGATTCGGTGAGGCGTGATTCTGGGTCCAGCACTTCCAGGGATCCTGAAGTGGAAGAAGAATACCAGATACAGTTGGCTTTGGAGCTGAGTGCAAAGGAGGACCCTGAGGCTGTCCAGATTGAAGCTGTTAAGCAGATCAGTTTGGGATCTTGTGACCCTGATAATACGCCTGCTGAAGTTGTGGCCTACCGATACTGGAATTACAATGCTCTTGGATTTGATGACAAGATCTCGGATGGTTTCTATGATCTGTTTGGGATCATAACTGAGTCAACCTCCGCAAGAATGCCTTCTCTTGTAGATTTGCAAGGAAAACCAACTTCAGATTCTGTCACATGGGAAGCAATATTGGTCAACAGGGCAGCTGATTCCAATTTGTTGAAACTTGAGCAAAGAGCCTTAGATCTGGCAGTCAAGTCAAGAAAAATTGTAGATAGTAATTTGGTGCATAAGCTTGCAATGCTAGTGGCTGACTATATGGGTGGACCAGTTGAAGATCCTGAAAGCATGACAAGAGCTTGGAGGAGTCTCAGTTACAGTCTAAAAGCAACCCTTGGTAGTATGGTTTTGCCGCTAGGTTCGCTGACCATTGGATTGGCTAGGCACCGTGCGTTGTTATTTAAGGTTTTAGCTGATAGCCTGGGCATCCCTTGTCGGTTGGTGAAAGGACTGCAATATACAGGCACAGATGATGTGGCAATGAACTTTGTCAAGATTGATGATGGAAGGGAGTACATTATTGACCTGATGGCAGATCCAGGAACACTAATTCCATCTGATGCAAGTGGATCGCATATCGATTATGATGAATCTTCTTTTGTAGCCACTCCATCATCAAGAGACCTTGATTCATCTCATATAACATCATTCAGCAGTGGGGTTGGAAGTTCATCTGAAGAAACTTCAGACTATGGGACACAGGATAAAGGAAACAGATCAAAACATTTTGTCCATGTGGGGAAACAATCTGATGAAAGCAGGCCCGCCCCAGGCAAGGAAGAATTAATGAGCCCCTTAAATGAATTCAAAAGTACCACCAATGTGGAGAAGGTCATTGTGACAGAATCTCCTAGCAGACCTAATTACCCATATATGCATGGGAAATCTCCATCTTGGACTGAAGGTATCAGTTTCCCAGCAGTACGTAGAATGAAAGTCAAAGATGTTTCCCAATACATGATTGATGCTGCAAAGGAGAACCCTAACTTAGCTCAAAAACTTCATGATGTTTTACTTGAAAGTGGAGTTGTTGCTCCTCCAAATTTATTTGCTGAAATTTATAATGAGCAGTTAGGTTCCCCAATTGAGGCCAATTTGCCAACTGAAGAAAAAGATGAATCTAAACAAGGAAGTGTACAGCAAGAAGCTAAGGTTGATGATAATCTAGGTCTTGCTCATTTTTTGCCTCCTTTGCCTCACCATAGAGTTCATCCCAAAGCATATCCTCACAGCCAGCTGGATTATTCTAAGCCTTTAGAAGGTTTAGGAATCAGCTTTCCTCTTGATACAAGGGAAGCTGCTGGACAGCACATAGCATCTCAGGCTGAAGCAACTCAAGTGAAATATGGAAAAAACGTCCCTGTTGCTGCAGCTGCAGCTGCTGCGGCTGCTGTTGTTGCATCTTCTATGGTAGTTGCAGTGGCAAAGTCAAGCACTGACTCAAATCTGGAGATTCCTGTAGCAGCAGCTGCTACTGCAACTGCTGCAGCTGTAGTAGCAACCACTGCTGCTGTCAGTAAGCAGTACGAGCAGAGCAGTCGAAGTGATGGAGATACAGAGGGTTCTGGTTATGAGCCTAAGGGTAGTGGTGATGGAGAGCATATTGCTTTAGGAGCAAACTCAGAGGGTGAGAGAACATCAGATAGATCAGCAAGTAATGATAGCACAAAATCCGATTCTGCGCTAGATGATGTCGCCGAGTATGACATTCCATGGGAGGAAATCACAATGGGCGAGCGTATTGGACTTGGATCATATGGGGAAGTGTGCCGTGGTGAATGGCATGGAACTGAAGTAGCTGTGAAGAGGTTTCTAGATCAACATATCTCCGGTGAATCGCTTGAAGAGTTCAAAAGTGAGGTCCAACTAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAACTCGACCTCCAAATCTTTCAATTGTTACTGAATTTCTTCCCAGAGGGAGTTTGTATAGATTAATCCACCGACCTAACAATCAATTAGATGAGCGAAGGCGGTTGAGGATGGCCCTCGACGCTGCTCGAGGAATGAACTATTTGCACACCTCTACTCCAGTGATAGTGCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGACAAAAATTGGGTTGTAAAGGTATGTGATTTTGGCTTATCGCGAATGAAGTATAGTACATTCCTTTCCTCCAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCAGAAGTGTTAAGAAATGAACTTTCTGATGAAAAGTGTGATGTGTATAGCTTTGGGGTCATACTATGGGAGCTGTCTACTTTGCAGCAACCTTGGGGAGGAATGAACCCTATGCAAGTTGTTGGTGCCGTGGGCTTCCAACATCGCCGTCTTGAAATTCCAGATGATGTGGACCCTGCCATTGCGGATATTATCAGGCAGTGCTGGCAAACAGATCCAAAGCTGAGGCCCACATTTGCTCAAATCATGGGTGCTCTGAAGCCATTGCAGAAGCCAATTACTGTTTCTCAAGTGCCTCGATCAAGAGCTCAGTCATCACGAGTTGCTGAAGACCCCTCAGGATAG 3036 0.4483 MKNILKKLHIMSNQSEDAQGPSSSRSNKPSDGSSSSHTPKKISGWLHSVSNRQSPSPPSPNPVRVERMETCDSVSSGGLDVVSDSVRRDSGSSTSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGFDDKISDGFYDLFGIITESTSARMPSLVDLQGKPTSDSVTWEAILVNRAADSNLLKLEQRALDLAVKSRKIVDSNLVHKLAMLVADYMGGPVEDPESMTRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGLQYTGTDDVAMNFVKIDDGREYIIDLMADPGTLIPSDASGSHIDYDESSFVATPSSRDLDSSHITSFSSGVGSSSEETSDYGTQDKGNRSKHFVHVGKQSDESRPAPGKEELMSPLNEFKSTTNVEKVIVTESPSRPNYPYMHGKSPSWTEGISFPAVRRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPPNLFAEIYNEQLGSPIEANLPTEEKDESKQGSVQQEAKVDDNLGLAHFLPPLPHHRVHPKAYPHSQLDYSKPLEGLGISFPLDTREAAGQHIASQAEATQVKYGKNVPVAAAAAAAAAVVASSMVVAVAKSSTDSNLEIPVAAAATATAAAVVATTAAVSKQYEQSSRSDGDTEGSGYEPKGSGDGEHIALGANSEGERTSDRSASNDSTKSDSALDDVAEYDIPWEEITMGERIGLGSYGEVCRGEWHGTEVAVKRFLDQHISGESLEEFKSEVQLMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHTSTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKYSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLEIPDDVDPAIADIIRQCWQTDPKLRPTFAQIMGALKPLQKPITVSQVPRSRAQSSRVAEDPSG* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3175 1011 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 1000 - -
Dod04g3175 1011 MobiDBLite consensus disorder prediction 1 102 - -
Dod04g3175 1011 MobiDBLite consensus disorder prediction 388 414 - -
Dod04g3175 1011 ProSiteProfiles Protein kinase domain profile. 731 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g3175 1011 SUPERFAMILY Protein kinase-like (PK-like) 717 981 IPR011009 -
Dod04g3175 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 850 862 IPR008271 GO:0004672|GO:0006468
Dod04g3175 1011 Pfam Ethylene-responsive protein kinase Le-CTR1 141 340 - -
Dod04g3175 1011 Gene3D Phosphorylase Kinase; domain 1 724 808 - -
Dod04g3175 1011 PRINTS Tyrosine kinase catalytic domain signature 954 976 IPR001245 GO:0004672|GO:0006468
Dod04g3175 1011 PRINTS Tyrosine kinase catalytic domain signature 910 932 IPR001245 GO:0004672|GO:0006468
Dod04g3175 1011 PRINTS Tyrosine kinase catalytic domain signature 891 901 IPR001245 GO:0004672|GO:0006468
Dod04g3175 1011 PRINTS Tyrosine kinase catalytic domain signature 844 862 IPR001245 GO:0004672|GO:0006468
Dod04g3175 1011 PRINTS Tyrosine kinase catalytic domain signature 805 818 IPR001245 GO:0004672|GO:0006468
Dod04g3175 1011 MobiDBLite consensus disorder prediction 8 54 - -
Dod04g3175 1011 MobiDBLite consensus disorder prediction 991 1011 - -
Dod04g3175 1011 SMART serkin_6 731 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g3175 1011 CDD STKc_MAP3K-like 737 980 - -
Dod04g3175 1011 MobiDBLite consensus disorder prediction 359 419 - -
Dod04g3175 1011 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 1000 - -
Dod04g3175 1011 Gene3D Transferase(Phosphotransferase) domain 1 810 994 - -
Dod04g3175 1011 Pfam Protein tyrosine and serine/threonine kinase 731 982 IPR001245 GO:0004672|GO:0006468
Dod04g3175 1011 MobiDBLite consensus disorder prediction 663 718 - -
Dod04g3175 1011 ProSitePatterns Protein kinases ATP-binding region signature. 737 758 IPR017441 GO:0005524
Dod04g3175 1011 MobiDBLite consensus disorder prediction 359 387 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3175 Dod-Chr4 55422219 55429718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3175 1 1003 MAP Kinase Kinase Kinase AT1G73660 61.813 0.0 1170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Dod04g3175 PK_Tyr_Ser-Thr 2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3175 - - gmx:100778331 1595.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3175 04 55422219 55429718 Dod02g3727 02 76058192 76062038 PCT