Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3173 ATGGGAGGTGGTGGTGGTGGAGGAACACTCGTGGAAGGCATTCGACGCTTGTTTCAAAGACGCGCTTCTTCTTCTATTAAGCAGAATGATGAGGACCATGTTATTACGAATGGTAATGGTAATAACAACAACAACAATAATAGTGGAAGCCGCGTCCACGTGAGAGATTTGCGGGCTCAACTGGCCAACATTCCCATTCCCAATCAGGAAAACGAACTCATCATCGAAGAAGACTTTGATATCTCGGGATTGAAGCCGCTCAAAGTCCCTACGCAGATCATCTTCAGACCTTCTTCCATGGATCCACACAAAAAGGGTGCTCCAGAAGCAGATTTCTTCACCGAGTATGGAGAAGCAAGTCAATACCAGATTCAAGAAGTTATTGGAAAAGGAAGTTATGGCGTCGTGGCCTCTGCCGTTGACACTCATACCGGGGAAAAGGTTGCAATCAAGAAAATCAATGATGTTTTTGAACATGTATCAGACGCCACACGGATCCTAAGAGAAATTAAACTCCTAAGGTTGCTACGGCATCCTGATATAGTAGAAATTAAGCATATTATGCTTCCTCCTTCACGGCGAGAGTTCAAGGATATCTATGTTGTGTTTGAGTTGATGGAGTCTGATCTTCATCAAGTAATTAGGGCAAATGATGATCTTACTCCTGAGCACCACCAATTTTTCTTGTACCAACTTCTTCGCGGCCTGAAATATATACATACAGCAAATGTGTTTCATCGTGATTTGAAGCCCAAAAATATTCTAGCCAATGCTGATTGCAAGCTAAAGATATGTGATTTTGGGCTTGCTCGAGTTTCTTTTAATGATGCTCCATCAGCTATATTCTGGACTGACTATGTTGCAACTCGGTGGTACCGTGCACCTGAACTATGTGGCTCTTTTTTCTCAAAATATACCCCCGCAATTGATATTTGGAGCATTGGATGCATATTCGCAGAAATGCTCACTGGAAAGCCATTGTTTCCTGGGAAAAATGTGGTGCATCAATTGGATATCATGACAGATTTGCTTGGCACTCCTCCAGCTGAGTCCATTGCAAGGATTCGTAATGAGAAAGCCAGAAGGATATCTTAG 1095 0.4283 MGGGGGGGTLVEGIRRLFQRRASSSIKQNDEDHVITNGNGNNNNNNNSGSRVHVRDLRAQLANIPIPNQENELIIEEDFDISGLKPLKVPTQIIFRPSSMDPHKKGAPEADFFTEYGEASQYQIQEVIGKGSYGVVASAVDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIRANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDIMTDLLGTPPAESIARIRNEKARRIS* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3173 364 SMART serkin_6 122 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g3173 364 ProSitePatterns Protein kinases ATP-binding region signature. 128 152 IPR017441 GO:0005524
Dod04g3173 364 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 80 362 - -
Dod04g3173 364 Gene3D Transferase(Phosphotransferase) domain 1 206 362 - -
Dod04g3173 364 Gene3D Phosphorylase Kinase; domain 1 120 205 - -
Dod04g3173 364 Pfam Protein kinase domain 122 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g3173 364 MobiDBLite consensus disorder prediction 22 50 - -
Dod04g3173 364 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 80 362 - -
Dod04g3173 364 ProSitePatterns MAP kinase signature. 157 260 IPR003527 GO:0004707|GO:0005524|GO:0006468
Dod04g3173 364 SUPERFAMILY Protein kinase-like (PK-like) 118 357 IPR011009 -
Dod04g3173 364 ProSiteProfiles Protein kinase domain profile. 122 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3173 Dod-Chr4 55387456 55389787 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3173 5 362 MAP Kinase Gene Family AT1G18150 75.487 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Dod04g3173 Pkinase 2.8e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3173 - - gmx:100780831 598.201