Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3142 ATGGATCCTCAACCACCACCGCAACAGCCACCCCTCTCGGCCGCCGCAGCCACCATCCTACTAAACAACCACCACCCTGACTCATCAGTGGAGTCCTCTCCCAGTTGCCGCGCGAAGGCTGAACCATGGCCTGATCATGACCATCCTCTCCTCCCTCATGTTCCAGGTGCCAGGCTCCGCCTAATTATCAGCTACGGCGGCCACATCATGCCACGTCTGCATGACAGGTCCCTTTCCTACGCCGGCAACGACACCCGCATGGTCGCCGTTGGCCGCCACACCTCCCTCAAAGACCTCTGCGCCCGCCTCTCTCGCACGCTCCTGCATGGAAGACCCTTCACTCTCAAGTACCAGCTCCCCAACGAGGACCTCGATAACCTCATCACCGTTACCACTGACGACGACCTCGATAACATGATCGAAGAGTACGACCGTTTGTCTTTAAAACCTCCTCCTCCTCCTTCTTCTTCTTTTTTAACTTCGCGCCTCAAGGTGTTTCTCTTCTTCTGTAAACCAGACACCGCGCTTTCAATGGGTTCACTTCTTGAGGATGCCAGCTCTGAGACGTGGTTCGTGGACGCTCTCAACAACTCGGGGATTTTGTCCCGTGTTGTTTCGGATTATGCTGCTGTTGATGAATGCCTCATGAATCTTGATGATGGGGTCCCTCCTGCTAGTGGTGGTTCTAGCAATGATTTGGAGGGTAATGCTGCTACTGCTGTTGCTGTTGTTGGTGATGGTAACAAGCAGGGTAATAAGCAGCATTTGGGCGATGTGCATTCGGTGCCTGGATCCTCTCTGGTATTGGAGAATAACTCGTCGTCTTATGGGTCTTCTTCAATGGCTAACCTGCCTCCTATAAGGGTTCGTGTTGATGAGAATGGTGGCAGCAGGCTCTAG 900 0.5367 MDPQPPPQQPPLSAAAATILLNNHHPDSSVESSPSCRAKAEPWPDHDHPLLPHVPGARLRLIISYGGHIMPRLHDRSLSYAGNDTRMVAVGRHTSLKDLCARLSRTLLHGRPFTLKYQLPNEDLDNLITVTTDDDLDNMIEEYDRLSLKPPPPPSSSFLTSRLKVFLFFCKPDTALSMGSLLEDASSETWFVDALNNSGILSRVVSDYAAVDECLMNLDDGVPPASGGSSNDLEGNAATAVAVVGDGNKQGNKQHLGDVHSVPGSSLVLENNSSSYGSSSMANLPPIRVRVDENGGSRL* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3142 299 Gene3D - 79 167 - -
Dod04g3142 299 PANTHER OS05G0427100 PROTEIN-RELATED 1 293 - -
Dod04g3142 299 Pfam PB1 domain 77 150 IPR000270 GO:0005515
Dod04g3142 299 ProSiteProfiles PB1 domain profile. 58 155 IPR000270 GO:0005515
Dod04g3142 299 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 1 293 - -
Dod04g3142 299 SMART PB1_new 73 169 IPR000270 GO:0005515
Dod04g3142 299 CDD PB1_UP2 62 168 - -
Dod04g3142 299 SUPERFAMILY CAD & PB1 domains 74 179 - -
Dod04g3142 299 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3142 Dod-Chr4 55092719 55093618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3142 58 197 MAP Kinase Kinase Kinase AT5G57610 39.716 3.61e-22 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3142 - - cam:101514979 299.671