Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3133 ATGCTTATTATCCCAGCTAGGTGCCAAGATGCAGTGGTGATGGGGATGCTGAAGAATGCAATCAATGCCCCTATTAGCTTACAATGGGCAGACCCTGATGTGTGCAAATGGAAGCGTGTTAAATGTGATTCAAGGAAACGTGTCACTGCTATTCAAATTGGAAACCAGAACCTCCAGGGCTATCTCCCTGGGGAACTTGAGAAGTTGACATCATTGGAAATTTTTGAGTGCCAATACAATAGCCTCACCGGATCATTCCCTTACCTTTCAATTTCCTTACAGAAGTTGATAATCCATGACAACAAGTTCAACTTCATACCTGACGAATTCTTCAAGGGAATGAACAGTTTGCAAGAAGTAAACATGGATGATAACCCCTTCAATCCATGGCAAATTCCTGCCACCCTCAGGGATTGTGTTTCACTCCAGTCTTTTAGTGCTCAGAAGGTTGGCTTTGTTGGGACTATCCCTGATATTTTTGGCAAGAATGGTGCGCTTCCAGGTTTAGTTTTCTTGGGATTGTCTGGTAATTCTCTTGAAGGTGCTTTGCCTTCAAGCCTCTCGAGTAGCTCAATCGAGGGCTTATTGGTGAATGGGCAAAGTAGTAACTCTAAACTCAATGGTACCCTTACGGTGTTACAAAACATGACATCCTTGAAGCAAGTTTGGGCTAATGGTAATTCATTTACTGGTCCTATACCAGACTTGTCAAACCTTGATCAATTGTTTGGATTGAATTTGAGGGATAACCATTTGACAGGTGTTGTTCCACCTTCCCTCGTAGCCCTTCCAAGCCTGCAAGTTGTGAACCTGACCAATAATTTTCTTCAAGGGTCCCCTCCTAATTTCAAAGATGTTGTAAAAGTTGACAATAACATGGATAAAGGGAGAAATCAATATTGCACAAATGTGCCTGGGCAGCCATGTAGTCCTATTGTAAATTCTTTATTATCCATTGTTGAACCCTTGGGCTATCCTTTGAATTTAGCTGAAAGTTGGAGTGATGTTTCCAATAATAATTTGTACGGCCAAGTACCACCATTTCGTAAAGGTATTGTTCTTAAATTTGGTGGGAATCCTGATATTGGAAAGGATAAACCTACACCAACTAGCTTGGGTCTAGATAATGGCAAGAAGCATAATACTGCGACTATTATTGGAATTTTGGTAGGGGTACTCATTTTTCTTGTTATAGGCATTCTAATATTTATAAAGTTCCGAAAAAAGTTTGTCCGAGTAAGAAAAGTTCAAGATACAATAGCAATTATGACACATCCTCGTAATTCTGGGGATGGAGATGCTATAAAGATAAGTGTGCCAGGGGCTAGTGTGCTTGGTGGAGGAGCAGAAACATTAAGTCCTGCTAATAATGTATGTCAGGTAGAAACTGGCAATTTGTTAATTTCAATTCAAGTTTTGCAAGAAGTTACCAACAATTTTAGTGAAGAAAACATATTGGGGAAAGGTGGTTTTGGCACCGTATATAAAGGCGAATTGCATGATGGGACAAAAATTGCAGTGAAAAGGATGCAATCAGGAATAGAAGAGGAGAAGGGGTTGGATGAGTTCATGGCTGAAATTGCAGTATTAACTAAGGTTCGACACAAAAATTTGGTTGCACTCTTAGGGTATTGCTTGGATGGAAATGAGAGACTTCTTGTCTATGAATACATGCCTCAAGGTGCTCTTAGTAAACATCTGTTTCATTGGGAAGAGGAGGGGTTAAAACCCCTTGAATGGAATACTAGACTTACTATTGCCTTGGATGTTGCTAGAGGTGTTGAGTATCTTCATGGTTTAGCCCAACAGATTTTTATTCATAGGGATCTTAAGCCATCAAACATTTTGCTTGGGGATAATGTAAGAGCTAAAGTAGCTGACTTTGGATTGGTTCGGCTTGCACCAGAAGGAAAAGCCTCATTTCAAACTAGGCTTGCAGGAACTTTTGGATATTTGGCACCAGAGTATGCAGAAGAACACTCGACTGATACTAGACCAGAAGAGAACTTGCACCTTGTTACATGGTTTCGTAGGATGCTAATTGAAAAAGACTCATTTCAAACTATCATTGACCCAACAATTGATGTTGATGAGGAAACCTTAAGTAGCATTAGCACTATAGCAGAGTTAGCAGGCCACTGTTGTGCAAGGGAGCCTCACCAGCGTCCTGACATGAGCCATGCAGTGAATGTGTTGTCACCTCTCATTGAGGTGTGGAAGCCTACAGAACCTGATGTTGATCATGTATATGGAATTAACTTTGATATGACATTGCCTCAAGCACTCCAAAGGTGGAAGGAATTTGAAGGAACAAGCACATTAGATTTAACTTCTGCTTCTGCTCGCCCATCTGCAATTACATTTTCAGATGGACGTTGA 2379 0.4069 MLIIPARCQDAVVMGMLKNAINAPISLQWADPDVCKWKRVKCDSRKRVTAIQIGNQNLQGYLPGELEKLTSLEIFECQYNSLTGSFPYLSISLQKLIIHDNKFNFIPDEFFKGMNSLQEVNMDDNPFNPWQIPATLRDCVSLQSFSAQKVGFVGTIPDIFGKNGALPGLVFLGLSGNSLEGALPSSLSSSSIEGLLVNGQSSNSKLNGTLTVLQNMTSLKQVWANGNSFTGPIPDLSNLDQLFGLNLRDNHLTGVVPPSLVALPSLQVVNLTNNFLQGSPPNFKDVVKVDNNMDKGRNQYCTNVPGQPCSPIVNSLLSIVEPLGYPLNLAESWSDVSNNNLYGQVPPFRKGIVLKFGGNPDIGKDKPTPTSLGLDNGKKHNTATIIGILVGVLIFLVIGILIFIKFRKKFVRVRKVQDTIAIMTHPRNSGDGDAIKISVPGASVLGGGAETLSPANNVCQVETGNLLISIQVLQEVTNNFSEENILGKGGFGTVYKGELHDGTKIAVKRMQSGIEEEKGLDEFMAEIAVLTKVRHKNLVALLGYCLDGNERLLVYEYMPQGALSKHLFHWEEEGLKPLEWNTRLTIALDVARGVEYLHGLAQQIFIHRDLKPSNILLGDNVRAKVADFGLVRLAPEGKASFQTRLAGTFGYLAPEYAEEHSTDTRPEENLHLVTWFRRMLIEKDSFQTIIDPTIDVDEETLSSISTIAELAGHCCAREPHQRPDMSHAVNVLSPLIEVWKPTEPDVDHVYGINFDMTLPQALQRWKEFEGTSTLDLTSASARPSAITFSDGR* 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3133 792 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 335 657 - -
Dod04g3133 792 SMART serkin_6 480 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g3133 792 PANTHER OSJNBA0070M12.3 PROTEIN 663 782 - -
Dod04g3133 792 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 1 334 - -
Dod04g3133 792 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 663 782 - -
Dod04g3133 792 SUPERFAMILY L domain-like 14 286 - -
Dod04g3133 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Dod04g3133 792 ProSiteProfiles Protein kinase domain profile. 480 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g3133 792 Gene3D Phosphorylase Kinase; domain 1 449 557 - -
Dod04g3133 792 SUPERFAMILY Protein kinase-like (PK-like) 461 732 IPR011009 -
Dod04g3133 792 ProSitePatterns Protein kinases ATP-binding region signature. 486 508 IPR017441 GO:0005524
Dod04g3133 792 Gene3D Ribonuclease Inhibitor 9 307 IPR032675 -
Dod04g3133 792 Gene3D Transferase(Phosphotransferase) domain 1 663 746 - -
Dod04g3133 792 Pfam Protein kinase domain 481 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g3133 792 Gene3D Transferase(Phosphotransferase) domain 1 558 662 - -
Dod04g3133 792 PANTHER OSJNBA0070M12.3 PROTEIN 1 334 - -
Dod04g3133 792 PANTHER OSJNBA0070M12.3 PROTEIN 335 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3133 Dod-Chr4 54985116 54988555 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3133 48 738 Receptor kinase-like Gene Family AT5G07280 30.730 7.07e-71 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Dod04g3133 Pkinase 1.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3133 - K00924 cit:102614313 807.749