Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3074 ATGGCGGCTAAACGGTTCTTTGATGATTCTGATAAAGACCCAGATAAGCCGAACGACAAACGGATGAGACCTACTAGACCTTCTTTTGCTTCTGTAATAGGAGAAGTCGTTATGGTGAAGAACCTGCAGAACCTTTTCTCAGGCTTGGAACCTTTGCTTAGAAGAGTGGTGAACGAAGAGTTGGAGCGAGTCTTAAGGCATAACATTCCACGCTCAATGACAAGGTCCCCTTCATTGAGAATCCAAGCGTTGGAGCAACCATCAAACTTTCAACTCGTGTTCACCAAGAAGCTTTCGCTGCCTATATTCACGGGTAGCAGGATCCTAGACGTTGATGGGAACCCCATCCATGTTGTCCTTGTAGACAAAAGCGAGAACCAAATGGTTCAAACAGGCCTCCCACATCCCATAAAGCTAGAACTGGTGGTCCTTGATGGAGATTTTCCTCCCAGTGAGAACGAGACATGGACGAGTGAGGAATTCAACAACCACATAGTGAAGGAGAGAACTGGGAAGAGGCCATTGCTCACTGGAGAATTGAATCTGACCCTGCGGGATGGTCATGCACCAATCACCGGCGACATAGAGTTCACAGATAACTCTAGCTGGATCCGTAGCAGGAAGTTCAGGGTTGCAGTGAGAGTGGCTCCTGGGAGTAACCAAAGTTTTAGAATTCGTGAAGGCATGACTGAGGCATTTGTTGTTAAGGATCACCGTGGTGAATTGTACAAAAAGCATCACCCACCAATGCTCCGCGACGAGGTGTGGCGGCTAGAGAAGATTGGGAAAGACGGAGCTTTCCACAAAAAACTGTCCAAAGAGGGAATTAATTCAGTCCAAGACTTTCTCAAGTTATCCGTTGTTGATCCTCATAGGCTCAGAAAGATTTTAGGCGTTGGGATGTCAGAGAAAATGTGGGATGTGACGATCAAGCACTGCAAAGACTTGCAACATGGGCAACAAACTCTATGTCTACCGCGGCCCTAA 987 0.4701 MAAKRFFDDSDKDPDKPNDKRMRPTRPSFASVIGEVVMVKNLQNLFSGLEPLLRRVVNEELERVLRHNIPRSMTRSPSLRIQALEQPSNFQLVFTKKLSLPIFTGSRILDVDGNPIHVVLVDKSENQMVQTGLPHPIKLELVVLDGDFPPSENETWTSEEFNNHIVKERTGKRPLLTGELNLTLRDGHAPITGDIEFTDNSSWIRSRKFRVAVRVAPGSNQSFRIREGMTEAFVVKDHRGELYKKHHPPMLRDEVWRLEKIGKDGAFHKKLSKEGINSVQDFLKLSVVDPHRLRKILGVGMSEKMWDVTIKHCKDLQHGQQTLCLPRP* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3074 328 PANTHER PROTEIN, PUTATIVE-RELATED 1 319 - -
Dod04g3074 328 MobiDBLite consensus disorder prediction 1 23 - -
Dod04g3074 328 MobiDBLite consensus disorder prediction 1 26 - -
Dod04g3074 328 Pfam Calmodulin binding protein central domain 250 314 IPR046830 -
Dod04g3074 328 Pfam Calmodulin binding protein-like N-terminal domain 90 238 IPR046831 -
Dod04g3074 328 PANTHER OS02G0177800 PROTEIN 1 319 IPR012416 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3074 Dod-Chr4 54449914 54453825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3074 3 314 Calmodulin-binding Proteins AT5G57580 55.096 3.30e-109 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3074 - - vra:106766894 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3074 04 54449914 54453825 Dod02g3661 02 74918259 74923778 PCT