Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3064 ATGTTTACATCAAGGAAGAAAATCCACAAAGATAAGGATGCTGAACCGACTGAGTTTGAAGAGTCAGTTGGGCAGGCATTGTTTGATATTGAAAATACTAACCAGGAGCTTAAAAGTGATCTGAAGGATCTATACATAAATTCTGCAGTGCAAATTGATGTTTCTGGGAACCGCAAGGCTGTAGTCATCCATGTCCCATACAGATTAAGGAAAGGCTTCCGGAAGATTCATGCTAGGCTTGTGAGGGAGCTTGAGAAGAAGTTTAGTGGCAAGGATGTAGTTCTGATTGCCACTCGGAGGATAGTAAGGCCTCCAAAGAAAGGCTCTGCTGTTCAGCGTCCCCGCACCCGCACCCTCACTTCTGTTCATGAGGCAATGCTGGAGGATGTTGTGTTGCCTGCTGAGATTGTTGGGAAGCGTGTGAGGTATAGAATCGATGGATCCAAGATTATGAAGGTTTTCTTGGACCCAAAGGAGAGAAACAGCACAGAGTACAAGTTGGAGACTTTTGCCGCAGTGTACAGGAAGCTGTCTGGCAAAGATGTCGTGTTTGAATATCCCAACACAGAGGCTTAG 576 0.4549 MFTSRKKIHKDKDAEPTEFEESVGQALFDIENTNQELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHARLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRTRTLTSVHEAMLEDVVLPAEIVGKRVRYRIDGSKIMKVFLDPKERNSTEYKLETFAAVYRKLSGKDVVFEYPNTEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3064 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Dod04g3064 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Dod04g3064 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
Dod04g3064 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3064 Dod-Chr4 54378211 54380438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3064 1 187 Cytoplasmic Ribosomal Protein Gene Family AT5G16130 80.214 4.59e-113 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3064 K02993 - gmx:100527642 362.073