Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3018 ATGGCAAGGGCTGAGAGAGTCATGATGATGGATGTCACTGGCTACCCTGATGATGATAGGCATGAAGTGAACTTCGGCAAGCCGAGAGGGTTTATGACGAAACTGAAATCTGGAGTCAAAGAAACGCTGTTCCCGGACGATCCCTTTAGGCTGTGCAACAAAGAAGAGAAGCCGTTGCTTAGGGCCCTCAAATGGCTTCAGTACTTCATTCCAGTCTTCGAGTGGCTCCCCACTTACACTTGGCGCATGTTCTGCTCCGACTTCTTCGCTGGCCTCACCATCACCAGCCTTGCTGTCCCACAAGGCATTAGCTATGCCAAACTCGCTGGTCTTCCTCCCATAATTGGCATGTATAGCTGCTTTGTTCCCCCCATTGTGTACACTATTTTTGGGAGCTCAAGGCACTTGGCAGTGGGGACGATCGCATCAGCATCGTTGCTTATATATCAAACTATCTCAACCGTGGTGAGGCCAGAAGACAACCCTACATTGTACCTTCATTTGGTTTTCACAACTACCTTAATCGCCGGTGCCTTCCAAGCTTGTTTGGGTTTTCTCAGGTTGGGAATATTGGTGGATTTCTTGCCCCATTCTACCATCACTGGCTTCATGGGAGGGGCAGCAGTAATGCTCACCCTCCAACAACTGAAGGGTATTTTCGGCCTGAAACATTTTGTGAGTAAAACAGACCTCGTAGCAGTGGTGAATGCCATATGGATCAACAGGCGCGAGGTTCTCTCTTTGCAATATATATATATATATATATATATATGTATACTCTTTCAGAGGAATAGGAACCCGAAACTCTTCTGGGTATCAGCTTTAGCTCCATTGACAACTGTGATAGTAGGCGGTGTTTTTACGTACCTCGTCAAGGGCCAACGACATGGAATTCAAATTGTTGGTCACCTCGGGAAAGGAATAAATCCTCCATCCATCCAGCATTTGAACTTTGACCGTAAATATTTACCACAAACGCTGAGGGCTGGTCTTATCACAGGCGTTATATCAATGGCGGCAAGAAATTCTAATTCCGAGGGAATAGCAATAGGAAGAAGCTTTGCTGTGGCTGAAAACACTCCTCTAGATGGGAACAAAGAAATGATAGCTTTTGGTCTTATGAACTTATGTGGTTCTTTTACTTCAAGTTACTTGACTACTGGACCATTTTCCAAAACGGCTGTGAGTTACGTTGCAGGGTGCAAGACGCCTATGTCAAACTTGGTGCAGGCACTCCTAATGGCACTCACACTAGAGTTTTTGGCTCCGCTTTTTGGTCACACTCCTCTGGTAGCTCTATCAGCTATTATAATATCGGCCGTGCTGGGGTTTCTTAATTATGCCGAAGCTATTCATCTTTATAAAGTCGACAAGTTTGATTTTATTATTTGCATGGCGGCCTTTCTCGGAGTTATTTTTGTAGCCTTGGATGTTGGCCTCATGCTCTCAGTTGCTCTTAGCTTGATTAGAGCACTCTTATATGTGGCTAGGCCGGCCACATGTAAGCTTGGAAAGGTACCAGACTTGGGCTTATATCGAGATGTTGAGCAGTACACTGCTGCAACATTCCAAGGAGTTCTAATTGTGCAACTTGGTTCTCCCTTGTACTTCGCAAATTCTAACTACATCAAAGAAAGAATCATGAGGTATATTCGAAGTGAGCAAGACTCTAGCGGAGATACCATTGAGCAGATCATACTGGATTTGTCAGGAGTGACTTCCATTGACATCACTGCAATTGAAGGATTGTGGGAAGCAAATAAAATCTTCGAAAATAATGGAATGCAGATATCTTTCGTAAACCCTAGGCTGGAGGTTTTGGAGAAACTGATAGCATCCAAGTTCGTTGCCAGGGTTGGGAAGGAGTCATTTTTTCTTACATTGGACGACGCAGTAAAGGCAAGTCAATGCACACTTGGCAAAAAGACGACCAATTATATGGACGAGGCAGTTCGAGAAACAAATCATCAATCTAATATAGCAGAATTCTAA 1992 0.4443 MARAERVMMMDVTGYPDDDRHEVNFGKPRGFMTKLKSGVKETLFPDDPFRLCNKEEKPLLRALKWLQYFIPVFEWLPTYTWRMFCSDFFAGLTITSLAVPQGISYAKLAGLPPIIGMYSCFVPPIVYTIFGSSRHLAVGTIASASLLIYQTISTVVRPEDNPTLYLHLVFTTTLIAGAFQACLGFLRLGILVDFLPHSTITGFMGGAAVMLTLQQLKGIFGLKHFVSKTDLVAVVNAIWINRREVLSLQYIYIYIYICILFQRNRNPKLFWVSALAPLTTVIVGGVFTYLVKGQRHGIQIVGHLGKGINPPSIQHLNFDRKYLPQTLRAGLITGVISMAARNSNSEGIAIGRSFAVAENTPLDGNKEMIAFGLMNLCGSFTSSYLTTGPFSKTAVSYVAGCKTPMSNLVQALLMALTLEFLAPLFGHTPLVALSAIIISAVLGFLNYAEAIHLYKVDKFDFIICMAAFLGVIFVALDVGLMLSVALSLIRALLYVARPATCKLGKVPDLGLYRDVEQYTAATFQGVLIVQLGSPLYFANSNYIKERIMRYIRSEQDSSGDTIEQIILDLSGVTSIDITAIEGLWEANKIFENNGMQISFVNPRLEVLEKLIASKFVARVGKESFFLTLDDAVKASQCTLGKKTTNYMDEAVRETNHQSNIAEF* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3018 663 Gene3D STAS domain 497 638 IPR036513 -
Dod04g3018 663 ProSiteProfiles STAS domain profile. 516 635 IPR002645 -
Dod04g3018 663 PANTHER SULFATE TRANSPORTER 3.5-RELATED 17 644 IPR030316 GO:1902358
Dod04g3018 663 CDD STAS_SulP_like_sulfate_transporter 520 628 - -
Dod04g3018 663 Pfam Sulfate permease family 84 466 IPR011547 GO:0016021
Dod04g3018 663 SUPERFAMILY SpoIIaa-like 517 634 IPR036513 -
Dod04g3018 663 PANTHER SULFATE TRANSPORTER 17 644 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod04g3018 663 TIGRFAM sulP: sulfate permease 71 631 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod04g3018 663 Pfam STAS domain 519 631 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3018 Dod-Chr4 53955957 53967192 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3018 23 639 Inorganic Solute Cotransporters AT5G19600 58.080 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3018 K17471 - gmx:100789107 823.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3018 04 53955957 53967192 Dod04g3018 04 53955957 53967192 ECH