Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3017 ATGAGTGGTCTCTCTGACTCATCTAGTAATGGCCAAGACGGCTCCAGCTTCTTCAGGATTCCCGTCATCAAGTATACTAAGCTCTTCATCAATGGGGATTTTGTTGATTCCTTATCAGGGAAGACGTTTGAAACCATAGATCCAAGAACAGGAGAAGTGACAGCGAAGATTAGCGAAGGAACTAAAGAAGATATTGACGTTGCTGTTAAGGCGGCACGTGAGGCATTTGACTCAGGCCCATGGCCCCGCTTGCCTGGTGCTGAAAGGGCAAGAATTATGATGAAATGGGCAGACCTTGTTGACCAGAACATAGACGAATTAGCGGCATTGGATGCTATTGATTCTGGCATTCTATACAATTTTTCCAAGTTTGGAATTCCTGCAGCAGCAAATACTTTACGCTACTATGCTGGTGCTGCTGATAAAATTCATGGTGAGGTATTAAAAATGTCCCGGGAGTTCCACGCATATACACTGTTGGAGCCAATTGGTGTTGTGGGACACATAATTCCATGGAATGCCCCCTCTAGCATGTTCTTCTCAAAGGTCAGCCCTTCCTTAGCCGCAGGCTGCACCATGGTCCTCAAGCCAGCTGAACAGTCACCCCTGTCTGCCCTCTTTTATGCTTATCTAGCAAAACAGGCTGGAATCCCAGCTGGAGTGCTCAATGTAGTGCCCGGATTTGGCCCAACAGCTGGTGCTGCAATAAGCTCACACATGGACATTGATGCGGTCAGCTTTACTGGTTCAGTTGAAGTAGGCCGTGAAGTGATGCAGGCTGCAGCTAGGAGTAACTTGAAACCGGTTTCACTTGAATTAGGAGGCAAGTCACCCCTTATTATATTTGACGATGCTGATGCAGACAAAGCTGCCGAGCTTGCACTTACGGGGATATTTTTCAATAAGGGAGAAGTTTGTTGTGCAGGTTCTCGTGTGTTTGTTCAGGAAGGGATCTACGATGAACTAGAGAAGAAGTTGGTGAAGAAGGCAAAAGCTTGGGTCGTTGGGGATCCTTTTGATCCTAAATCTCAACAAGGGCCTCAAGCTGACAAGAATCAACTCGAAAAAATTCTTTCCTATATTGAGCATGGAAAGAAAGAGGGAGCAACCCTTCTGACAGGAGGTAAAGCACTGGGCAGCAAGGGCTACTACATTGAACCTACAATTTTCTCTGATGTAAAGGACGACATGCTTATAGCACAAGATGAAATATTTGGCCCCGTAATGGCATTGATGAAGTTTAAGACCATTGAAGAAGCAATTGAGAGAGCCAACAATACCAGATATGGCCTGGCAGCAGGCATTGTGACCAAGAACTTGGATACAGCAAACACCATGTCAAGGTCCATTCGCGCAGGCATTATTTGGATTAATTGCTATTTTACCAGTGGGTGTGACATTCCTTTTGGAGGGTATAAGATGAGTGGATTTGGAAGAGAATATGGATTGGAAGCCCTTCACAAGTACTTGCAAATTAAATCTGTTGTAACTCCCATTTACAATTCTCCATGGCTTTGA 1518 0.4513 MSGLSDSSSNGQDGSSFFRIPVIKYTKLFINGDFVDSLSGKTFETIDPRTGEVTAKISEGTKEDIDVAVKAAREAFDSGPWPRLPGAERARIMMKWADLVDQNIDELAALDAIDSGILYNFSKFGIPAAANTLRYYAGAADKIHGEVLKMSREFHAYTLLEPIGVVGHIIPWNAPSSMFFSKVSPSLAAGCTMVLKPAEQSPLSALFYAYLAKQAGIPAGVLNVVPGFGPTAGAAISSHMDIDAVSFTGSVEVGREVMQAAARSNLKPVSLELGGKSPLIIFDDADADKAAELALTGIFFNKGEVCCAGSRVFVQEGIYDELEKKLVKKAKAWVVGDPFDPKSQQGPQADKNQLEKILSYIEHGKKEGATLLTGGKALGSKGYYIEPTIFSDVKDDMLIAQDEIFGPVMALMKFKTIEEAIERANNTRYGLAAGIVTKNLDTANTMSRSIRAGIIWINCYFTSGCDIPFGGYKMSGFGREYGLEALHKYLQIKSVVTPIYNSPWL* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3017 505 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 8 505 - -
Dod04g3017 505 SUPERFAMILY ALDH-like 19 501 IPR016161 GO:0016491
Dod04g3017 505 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 299 310 IPR016160 GO:0016491
Dod04g3017 505 Pfam Aldehyde dehydrogenase family 35 495 IPR015590 GO:0016491
Dod04g3017 505 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE RF2C 8 505 - -
Dod04g3017 505 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 271 278 IPR029510 GO:0016491
Dod04g3017 505 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 275 464 IPR016163 GO:0016620
Dod04g3017 505 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 30 493 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3017 Dod-Chr4 53936746 53954805 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3017 10 505 Aldehyde Dehydrogenase Gene Family AT3G24503 68.737 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3017 K12355 - gmx:100783920 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3017 04 53936746 53954805 Dod02g3597 02 73779202 73792071 PCT