Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3016 ATGTTGATCTCAAAACATGGCGGTACCATGTCAACAGAGAGGATGATGATCTCTTGTGAGGGTCTGGGATGCAATTTTCACGATAATCCCCATAAAATGATACGTGACAGACCCCATAACTCATCAGAAGCAGCCCATTCCGTTTTTTTTCCCTTGTTTTGCCCTCAAAAGCGGGTTAGCTTTACTGGTTCAACAGGGGTAGGCCGTGAAATAATGCAGGCTGCAGCTAGGGACAAAGCTACTGAGCTTGCTCTCTTGGGAATCCTATTTAACAAGGGAGAAATTTGTGTTGCAAGTTCCCGTGTGTTCGTCCAGGAAGGGATCTATGATGAATTTGAGAAAAAGCTTGCAGAGAAGGCAAAAGCTTGGGCTGTGGGGGATCCTTTTGATCCTAAATCTCAACAAAGGCCTCAAGTTGACAAGAAACAATTTGAAAAAATTCTTTCCTACATCGAGCATGGAAAGAGAGAAGGAGCTACCCTTTTGACCGGGGTTAGTTATTACTACAAGGGTTGGTTATTACATTGA 528 0.4356 MLISKHGGTMSTERMMISCEGLGCNFHDNPHKMIRDRPHNSSEAAHSVFFPLFCPQKRVSFTGSTGVGREIMQAAARDKATELALLGILFNKGEICVASSRVFVQEGIYDEFEKKLAEKAKAWAVGDPFDPKSQQRPQVDKKQFEKILSYIEHGKREGATLLTGVSYYYKGWLLH* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3016 175 Pfam Aldehyde dehydrogenase family 78 165 IPR015590 GO:0016491
Dod04g3016 175 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 77 165 - -
Dod04g3016 175 SUPERFAMILY ALDH-like 57 167 IPR016161 GO:0016491
Dod04g3016 175 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 89 100 IPR016160 GO:0016491
Dod04g3016 175 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 70 173 IPR016163 GO:0016620
Dod04g3016 175 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 77 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3016 Dod-Chr4 53921915 53926603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3016 58 164 Aldehyde Dehydrogenase Gene Family AT3G24503 64.122 6.76e-48 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3016 K12355 - gmx:100811540 170.244