Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3004 ATGGAAAGCCGGCTCAAAACACGAATCTCTCGCATGTTCCGATCATCATTCGGGTCGTGCCGGACTCGAAACATCACCGACGTGATGGAAAAAGCAGTGTTCGCCCCACCTCACTACCACGGCTTCCACCTCATGGAGCCACCTTCACCCAAACCACGACCGTTTCCCTCTATTTGCAGACCCCAGACATCCGAAACCATCGACGACAACTGCATCATGTCGTCGTTTAAGGATTCACTCCCAAGACGCTGTAAGGTCTCAGAGTGGTCATCACCGTTTGTCTCCAACAACCACCACCACCTCGACGGCAGGTTGTGCCCCCCGGCATCCCCAAACATACCCCTCAACACAATCCACGAACACGAGTTGGGTTTCTACGACAAAACAAACAACTCAGACGTGAGGAATATGAGGAAAAAGAAAAAGAAGAAGAAGAAGAAGAAGGTGGTGAATACCCAGAAGAAAAGAGACATTTTCCCATTTAACTCTTGCGCTAAAGACACCAACTTTGGAGGGTATTGGTGGTATAGCAGTGACGAGGACGATGAAACGGATACCCTTTTCTCCTCAAAGAGCCTCTCTTCCGATTCCTCAAGGTCTCGCCGCCCGCGCCGTTCTCGCCGGAAAACCCACGGCGGTGACCGGAAAGATCATCGGAGCTCCGAAATGGGGGTCGTGATGCCGCTGCAGGGGAAGGTGAAGGACACGTTCGCTGTGGTGAAGCGATCGAGTGATCCTTACAATGATTTTAGGACCTCCATGGTGGAGATGATCGTTGAGAAGCAGATATTTTCCCCAAGTGGTTTGGAGAATCTCTTGCAGTGTTTTCTCTCTCTGAATTCGTATCATCATCATAAGATCATTGTAGAAGTTTTCACCGAGATTTGGGAAGCTTTGTTCTCTGACTGGCTTTGA 915 0.4995 MESRLKTRISRMFRSSFGSCRTRNITDVMEKAVFAPPHYHGFHLMEPPSPKPRPFPSICRPQTSETIDDNCIMSSFKDSLPRRCKVSEWSSPFVSNNHHHLDGRLCPPASPNIPLNTIHEHELGFYDKTNNSDVRNMRKKKKKKKKKKVVNTQKKRDIFPFNSCAKDTNFGGYWWYSSDEDDETDTLFSSKSLSSDSSRSRRPRRSRRKTHGGDRKDHRSSEMGVVMPLQGKVKDTFAVVKRSSDPYNDFRTSMVEMIVEKQIFSPSGLENLLQCFLSLNSYHHHKIIVEVFTEIWEALFSDWL* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3004 304 ProSiteProfiles OVATE domain profile. 239 298 IPR006458 -
Dod04g3004 304 MobiDBLite consensus disorder prediction 187 224 - -
Dod04g3004 304 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 237 300 IPR006458 -
Dod04g3004 304 MobiDBLite consensus disorder prediction 135 152 - -
Dod04g3004 304 Pfam Transcriptional repressor, ovate 243 300 IPR006458 -
Dod04g3004 304 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 302 IPR038933 GO:0045892
Dod04g3004 304 MobiDBLite consensus disorder prediction 128 152 - -
Dod04g3004 304 PANTHER TRANSCRIPTION REPRESSOR OFP8-LIKE 1 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3004 Dod-Chr4 53824195 53825428 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dod04g3004 Ovate 5.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3004 - - adu:107478678 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3004 04 53824195 53825428 Dod04g3004 04 53824195 53825428 ECH