Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3002 ATGTCAACGGCGCCCTCCCCTGGGGCTTCGCCGGCCCCCGCTTCGCCGCCGGCCACCAACACAACTTCTCCTTCGCCGCCCTCCAACTCTGCTCCACCTCCAGCCGCTGCTTCCCCTCCGCCGCCAACAACCACGCCCTCAACTTCTCCTCCGCCTCCGTCTGACGCCAAAACGCCTCCCTCCCCAGCGGGCCAGAGCTCGCCTCCTCCTCCTCCGTCGAGCTCAGGCTCGCCTTCAACTCCCTCTCCGCCTTCCTCCGCGTCATCCCCGCCGACGTCGTCGTCTTCTTCGAGTATTCCGACCGGCGTCTTTGTGGGAATCGCCGTGGGGGCTGTGGCGATTGTTCTAGTGTTGAGCATTTTGTGCATTTGTTGTAGGAAGAAGAAAAGACGCGATGGCCAACACTACGCGCCGCCGCAGGGACCTAAAGATGACCCTTATGATGGCCACCCAGGCAGTTGGCAAAATAATGCTCCCACTCCTCCAAATCATGTGATCTCCGTTATGCCAAAGCCAACACCTTCTCCCCCTGCTGCATCACGTCCACCCCAATCGCCAGCCTATGTTCCTCAGTCTATGCCGCCTTTTGTGAGCAGCAGCGGCGGATCTGGCTCATACTATTCAGGCGGTGAAAATCCAGTTCCAGCAGCTCCTTCTCCAGGCATTGCATTGGGCTTCTCCAAGAGCACATTTACATATGAAGAGTTGGCACGTGCAACTGATGGCTTCTCTGATGCCAACCTCCTTGGACAAGGTGGATTTGGTTATGTCCACAGAGGACTTCTTCCCAATGGGAAGGAGATTGCTGTCAAACAGCTAAAGGCTGGAAGTGGGCAGGGGGAACGTGAATTCCAGGCTGAAGTGGAGATAATTAGCAGGGTTCATCACAGACATCTTGTTTCTTTGGTTGGATACTGCATCACTGGCACCCACAGGCTCCTTGTTTATGAATTTGTTGCAAACAATACATTGGAGTTCCATTTACACGGAAAAGGGCGACCTACGATGGAATGGCCCACAAGATTGAGAATTGCTTTAGGAGCTGCAAAAGGACTGGCATATCTTCATGAGGATTGTCATCCAAAAATCATCCATCGTGATATCAAAGCTGCTAACATCCTTCTGGATTTCAGATTTGAAGCAAAGGTTGCAGATTTTGGGCTTGCAAAGTTTTCTTCTGATGTCAATACTCATGTTTCCACTCGAGTGATGGGAACTTTTGGGTATCTGGCTCCAGAATATGCTTCAAGTGGAAAACTAACTGACAAATCAGATGTTTTCTCCTTTGGAGTTATGCTCTTGGAGTTGATTACTGGTCGTCGTCCAGTTGATTCAAGCCATACTTTTGTGGAGGATAGTTTGGTAGACTGGGCAAGGCCTTTGCTCACACGTGCTTTGGAAGATGAAAATTTTGATCCTCTGGTTGATCCAAGGCTCCAGGATGAATATGACCCCAGTGAGATGGCTCGCATGGTGGCATGTGCTGCAGCTTCCATACGATATTCAGCAAAGCGTCGACCAAGGATGAGCCAGATTGTTCGTGCACTGGAAGGAGACGCGTCTCTAGCTGATCTTAATGACGGAGTTAGACCAGGACACAGCACAGTCTACAATTCTCATGGAAGCTCAGATTATGACACAGCACAATACAAGGAAGACATGAAAAAGTTCAGAAAAATGGCATTGGGAACCCAGCAGTTTGGGGGCAGCAGTGAGTACAGCGGGCCTACAAGTGAGTACGGTTTAAACCCATCTGACTCCAGCAGTGAAAGCCAGCGCCGCCCGAGAAAGATCAAGAACAGTCAAGGTTACAGTGGATGA 1821 0.5124 MSTAPSPGASPAPASPPATNTTSPSPPSNSAPPPAAASPPPPTTTPSTSPPPPSDAKTPPSPAGQSSPPPPPSSSGSPSTPSPPSSASSPPTSSSSSSIPTGVFVGIAVGAVAIVLVLSILCICCRKKKRRDGQHYAPPQGPKDDPYDGHPGSWQNNAPTPPNHVISVMPKPTPSPPAASRPPQSPAYVPQSMPPFVSSSGGSGSYYSGGENPVPAAPSPGIALGFSKSTFTYEELARATDGFSDANLLGQGGFGYVHRGLLPNGKEIAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGTHRLLVYEFVANNTLEFHLHGKGRPTMEWPTRLRIALGAAKGLAYLHEDCHPKIIHRDIKAANILLDFRFEAKVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDSSHTFVEDSLVDWARPLLTRALEDENFDPLVDPRLQDEYDPSEMARMVACAAASIRYSAKRRPRMSQIVRALEGDASLADLNDGVRPGHSTVYNSHGSSDYDTAQYKEDMKKFRKMALGTQQFGGSSEYSGPTSEYGLNPSDSSSESQRRPRKIKNSQGYSG* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3002 606 MobiDBLite consensus disorder prediction 566 606 - -
Dod04g3002 606 CDD STKc_IRAK 249 518 - -
Dod04g3002 606 Pfam Protein tyrosine and serine/threonine kinase 248 515 IPR001245 GO:0004672|GO:0006468
Dod04g3002 606 ProSiteProfiles Protein kinase domain profile. 243 522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g3002 606 ProSitePatterns Protein kinases ATP-binding region signature. 249 271 IPR017441 GO:0005524
Dod04g3002 606 SMART serkin_6 243 516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g3002 606 SUPERFAMILY Protein kinase-like (PK-like) 225 516 IPR011009 -
Dod04g3002 606 MobiDBLite consensus disorder prediction 1 98 - -
Dod04g3002 606 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 4 597 - -
Dod04g3002 606 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 4 597 - -
Dod04g3002 606 MobiDBLite consensus disorder prediction 130 194 - -
Dod04g3002 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 363 375 IPR008271 GO:0004672|GO:0006468
Dod04g3002 606 MobiDBLite consensus disorder prediction 566 589 - -
Dod04g3002 606 MobiDBLite consensus disorder prediction 9 88 - -
Dod04g3002 606 Gene3D Transferase(Phosphotransferase) domain 1 319 527 - -
Dod04g3002 606 MobiDBLite consensus disorder prediction 165 190 - -
Dod04g3002 606 Gene3D Phosphorylase Kinase; domain 1 222 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g3002 Dod-Chr4 53785039 53788685 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3002 69 578 Trihelix Transcription Factor Family AT1G70460 50.674 1.98e-168 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Dod04g3002 PK_Tyr_Ser-Thr 2.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3002 - - gmx:100781944 800.045