Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g3000 ACAAACATGGCCTCCACGCAACGCAGCTCTGCCTTCTCTCTCTCACTCCTTTTCCTATTCCTCGCCATTTCTCTCTGCCGCCTCCGATTCCACCCTTCTTCCTCTGAACCCGGCCCCCCATCATCCCAAACCCTACCCCCGAATTCCACCACCCAACACCACGACGGTGGCCGCCGCAATTACATCGTGCGGTTCCGCGAGTACAAGACCGCCCACCACCACCGCGCTTACCTTGAATCCAACCTCCGATCCCCAGGCTGGCACTGGATCGACCGCCGCAACCCCGCCGCCAGCTACCCCACTGATTTCGGCCTTGTTTCCGTCCCCGATTCGGTTCACGACTGCCTCACCCGCCAGATTCGGACCCTGCCACTCGTTAAGGACGTGCATGTCGACATGGGCTACACGAGGGGCCTTCTCAACAATGATCACTCCCACAAAGCTGGTTCCTTTCTTGATGGGAAGAAGCGCCCCGGCAAGATATTTACGCCCATGTCCTTTAGCGATGAAGATGTTGATGGAACACCCCATTGTTCCTTCGTTCACAACTCTTCTGTTAAATTGGGAAGACAACTCTTGATGCAGAGATCTCAAGTGACTTCCATGTTTGGGGCGGAGGATCTCTGGGCAAAAGGGTACACTGGTGCTAAAGTCAAAATGGCTATATTTGATACTGGCATTCGAGCTAATCACCCTCATTTCCGTAACATCAAGGAGCGCACAAATTGGACCAATGAGGATACATTGAATGATAATCTTGGACATGGGACCTTTGTTGCTGGTGTTATTGCTGGGGTAGATGCAGAGTGCCTTGGTTTTGCACCAGATACAGAGATTTATGCATTTCGTGTGTTCACTGATGCACAGGTTTCATACACATCATGGTTCCTTGACGCCTTCAACTATGCAATTGCAACCAATATGGATGTGCTAAATTTGAGCATAGGCGGGCCTGATTATTTGGATCTTCCATTTGTTGAGAAGATATGGGAGATAACAGCAAATAACATTATCATGGTCTCTGCAATTGGAAATGATGGACCACTTTATGGAACTTTGAACAATCCTGCAGATCAAAGTGATGTAATTGGTGTTGGTGGTATTGACTATAGTGATCATATTGCTTCCTTTTCCTCACGTGGCATGAGTACCTGGGAGCTTCCTCATGGTTATGGTCGTGTGAAGCCAGACATAGTTGCATACGGACGGGACATAATGGGATCCAAGATTAGCAAGGGTTGTAAAAGTTTATCGGGAACTAGTGTTGCAAGTCCTGTTGTAGCTGGTGTTGTATGCTTGCTTGTAAGCATTATTCCTGAATCTAATCGAAAAGATATCTTAAACCCGGCAAGCATGAAACAAGCATTGGTTGAGGGTGCTGCAAAACTTTCTGGGCCTAACATGTTTGAGCAGGGTGCTGGCAGAGTTGATCTGTTAGAATCATATGAGATTCTTAAGAGCTACAAGCCCAGGGCAAGCATCTTCCCCAGCATCCTTGATTATACAGATTGTCCTTACTCATGGCCTTTTTGTCGTCAGCCGCTCTATGCAGGTTCCATGCCTGTCATCTTCAATGCCACTGTTTTGAATGGAATGGGTGTTATTGGCTATGTCGAAGGTCCACCAACATGGCATCCTTCTGATGAAGTAGGGAATCTTTTAAGCATTCATTTTACACATTCAGAGGTTATCTGGCCTTGGACTGGTTATTTGGCACTTCACATGCAAATCAAGGAAGAAGGCGCTCAATTTTCTGGAACGATTGAAGGCAATGTGACTCTTCGGGTTTCCAGTCCACCAGCTCAAGGAGAGAAGGACCCTCGAATCAGCATCTGTGTCCTTCACTTGAAGTTAAAAGTAGTGCCAACACCACCTCGGTCCAAACGAATTTTGTGGGATCAGTTTCATAGTATTAAATACCCACCTGGTTATATTCCAAGAGACTCCTTGGATGTTCGTAATGACATTCTTGACTGGCATGGTGATCATCTTCATACAAATTTTCACATCATGTTCAACATGTTACGAGATGCTGGCTACTATGTTGAAATACTTGGTTCTCCTCTTACATGCTTTGATGCTCGTCAGTATGGAACACTTCTAATGGTGGATCTTGAAGACGAGTACTTTGCTGAGGAGATTGAAAAACTTAGAGACGATGTTATACATACTGGATTGGGACTAGCTGTCTTTGCTGAGTGGTATAATGTAGATACCATGGTAAAAATGAGATTCTTTGATGACAATACACGGAGCTGGTGGACCCCTGTTACTGGAGGGTCAAATATTCCAGCACTTAATGATCTTTTGGCTCCGTTTGGGATTGCTTTTGGAGACAAGATCCTGAATGGTGATTTTTCACTTTTAGGTGAGCAGAGTCGATATGCTTCTGGAACTGATATAGTGAGGTTTCCAGGAGGTGGTTATGTACATAGCTTTCCTTTCTTGGATAGTTCCGAAAGTGGGGCAACTCAGAATGTGCTGCTGACTTCTGACACCAAAGCAGACACTCCAATTCTTGGTTTCACTGTGATGGGTGAAGGTGGTATAGCTGTATATGGGGATTCCAATTGTTTGGATAGTAGCCATATGGTTACTAATTGTTATTGGCTTCTAAAGAAAATACTAGATTTTACTAGTGGAGGTGTCAGAGATCCTGTGCTTTTCTCTGATTCAGTTAAGCTAAATACTCCATTGTATGAAGAGGACAATCAATTGCCGTCTCGCAGGACTGATGTAAATTTTTCAACATATTCAGCTGTCGTGGGGAAGGAATTGATCTGCAGGACTGACTCGAGGTTTGAAGTGTGGGGAACTAAGGGCTACAGTTTGCAGGTTAGAGGAAGGAACAGAAGATTGCCTGGTTATCCTGTCATTGATTTGGGGAGAGGATTGAATTCAACCTTTGATACTTCTAACAAAAGGAGTCCCATAATAACTATGAGAAATAAGGGTGACTCTCTTGGGAACAGGTACCTTGGCCTGTTCTATGGAGATGAGGTAAGAAACAGAAACAGTCCTATTGATTTGTTATCATTATCTTTTGTTTCATTGCCTTTGTATTTTGTGGCAGGTATTTTGCTATTGAGTTTTTGGCGTATTCGCCAAAAGCGACGCCGGCGAAGGAAAGGATCAGGCTCTGGTAGATTGGGC 3153 0.4513 TNMASTQRSSAFSLSLLFLFLAISLCRLRFHPSSSEPGPPSSQTLPPNSTTQHHDGGRRNYIVRFREYKTAHHHRAYLESNLRSPGWHWIDRRNPAASYPTDFGLVSVPDSVHDCLTRQIRTLPLVKDVHVDMGYTRGLLNNDHSHKAGSFLDGKKRPGKIFTPMSFSDEDVDGTPHCSFVHNSSVKLGRQLLMQRSQVTSMFGAEDLWAKGYTGAKVKMAIFDTGIRANHPHFRNIKERTNWTNEDTLNDNLGHGTFVAGVIAGVDAECLGFAPDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATNMDVLNLSIGGPDYLDLPFVEKIWEITANNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDYSDHIASFSSRGMSTWELPHGYGRVKPDIVAYGRDIMGSKISKGCKSLSGTSVASPVVAGVVCLLVSIIPESNRKDILNPASMKQALVEGAAKLSGPNMFEQGAGRVDLLESYEILKSYKPRASIFPSILDYTDCPYSWPFCRQPLYAGSMPVIFNATVLNGMGVIGYVEGPPTWHPSDEVGNLLSIHFTHSEVIWPWTGYLALHMQIKEEGAQFSGTIEGNVTLRVSSPPAQGEKDPRISICVLHLKLKVVPTPPRSKRILWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMFNMLRDAGYYVEILGSPLTCFDARQYGTLLMVDLEDEYFAEEIEKLRDDVIHTGLGLAVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGSNIPALNDLLAPFGIAFGDKILNGDFSLLGEQSRYASGTDIVRFPGGGYVHSFPFLDSSESGATQNVLLTSDTKADTPILGFTVMGEGGIAVYGDSNCLDSSHMVTNCYWLLKKILDFTSGGVRDPVLFSDSVKLNTPLYEEDNQLPSRRTDVNFSTYSAVVGKELICRTDSRFEVWGTKGYSLQVRGRNRRLPGYPVIDLGRGLNSTFDTSNKRSPIITMRNKGDSLGNRYLGLFYGDEVRNRNSPIDLLSLSFVSLPLYFVAGILLLSFWRIRQKRRRRRKGSGSGRLG 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g3000 1051 CDD Peptidases_S8_SKI-1_like 209 465 IPR034185 -
Dod04g3000 1051 MobiDBLite consensus disorder prediction 33 57 - -
Dod04g3000 1051 Gene3D Peptidase S8/S53 domain 184 481 IPR036852 GO:0004252|GO:0006508
Dod04g3000 1051 PANTHER PEPTIDASE S8 58 881 - -
Dod04g3000 1051 SUPERFAMILY Subtilisin-like 198 478 IPR036852 GO:0004252|GO:0006508
Dod04g3000 1051 PANTHER MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE-1 PROTEASE 58 881 - -
Dod04g3000 1051 PRINTS Subtilisin serine protease family (S8) signature 251 264 IPR015500 -
Dod04g3000 1051 PRINTS Subtilisin serine protease family (S8) signature 418 434 IPR015500 -
Dod04g3000 1051 PRINTS Subtilisin serine protease family (S8) signature 215 234 IPR015500 -
Dod04g3000 1051 Pfam Subtilase family 216 472 IPR000209 GO:0006508|GO:0008236
Dod04g3000 1051 ProSitePatterns Serine proteases, subtilase family, histidine active site. 255 265 IPR022398 -
Dod04g3000 1051 ProSitePatterns Serine proteases, subtilase family, serine active site. 419 429 IPR023828 -
Dod04g3000 1051 ProSiteProfiles Serine proteases, subtilase domain profile. 191 485 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g3000 289 1051 Subtilisin-like Serine Gene Family AT5G19660 79.297 0.0 1234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g3000 K08653 - jre:108979365 1666.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g3000 04 53705884 53710949 Dod04g3000 04 53705884 53710949 ECH